Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-468P-201ENST00000384003 109 ntBASIC2.9□□□□□ -1.95
LSM1O15116 SNORA1.3-201ENST00000384676 136 ntBASIC2.9□□□□□ -1.95
LSM1O15116 FO393413.1-201ENST00000402892 195 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.9□□□□□ -1.95
LSM1O15116 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.9□□□□□ -1.95
LSM1O15116 LUZP4P1-201ENST00000415420 344 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AC005326.1-201ENST00000429197 123 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AC011242.1-201ENST00000433596 1158 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.9□□□□□ -1.95
LSM1O15116 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.9□□□□□ -1.95
LSM1O15116 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.9□□□□□ -1.95
LSM1O15116 SNORA84-201ENST00000459229 133 ntBASIC2.9□□□□□ -1.95
LSM1O15116 RPL21P41-201ENST00000459863 264 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AL672167.3-201ENST00000465951 960 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AP000852.1-201ENST00000472460 573 ntBASIC2.9□□□□□ -1.95
LSM1O15116 SETP11-201ENST00000473027 690 ntBASIC2.9□□□□□ -1.95
LSM1O15116 RPS17P11-201ENST00000474297 293 ntBASIC2.9□□□□□ -1.95
LSM1O15116 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.9□□□□□ -1.95
LSM1O15116 BOLA3P3-201ENST00000505182 232 ntBASIC2.9□□□□□ -1.95
LSM1O15116 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.9□□□□□ -1.95
LSM1O15116 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.9□□□□□ -1.95
LSM1O15116 AC025881.1-201ENST00000518851 512 ntBASIC2.9□□□□□ -1.95
LSM1O15116 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.9□□□□□ -1.95
LSM1O15116 SETP7-201ENST00000552169 453 ntBASIC2.9□□□□□ -1.95
LSM1O15116 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.9□□□□□ -1.95
LSM1O15116 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.9□□□□□ -1.95
LSM1O15116 MIR4446-201ENST00000578505 67 ntBASIC2.9□□□□□ -1.95
LSM1O15116 RN7SL339P-201ENST00000580597 296 ntBASIC2.9□□□□□ -1.95
LSM1O15116 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.9□□□□□ -1.95
LSM1O15116 AC245036.5-201ENST00000596330 847 ntBASIC2.9□□□□□ -1.95
LSM1O15116 RPL23AP92-201ENST00000603609 255 ntBASIC2.9□□□□□ -1.95
LSM1O15116 NUTF2P8-201ENST00000604593 363 ntBASIC2.9□□□□□ -1.95
LSM1O15116 HSPE1P7-201ENST00000604681 321 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.9□□□□□ -1.95
LSM1O15116 AL512506.1-201ENST00000613918 449 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AL356585.4-201ENST00000623078 1229 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.9□□□□□ -1.95
LSM1O15116 AC091948.2-201ENST00000636510 279 ntBASIC2.9□□□□□ -1.95
LSM1O15116 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.9□□□□□ -1.95
LSM1O15116 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.89□□□□□ -1.95
LSM1O15116 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
LSM1O15116 AP003122.5-201ENST00000527668 3766 ntBASIC2.89□□□□□ -1.95
LSM1O15116 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM1O15116 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.89□□□□□ -1.95
LSM1O15116 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LSM1O15116 MIR493-201ENST00000385254 89 ntBASIC2.89□□□□□ -1.95
LSM1O15116 U3.19-201ENST00000390893 196 ntBASIC2.89□□□□□ -1.95
LSM1O15116 RNA5SP252-201ENST00000391131 119 ntBASIC2.89□□□□□ -1.95
LSM1O15116 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.89□□□□□ -1.95
LSM1O15116 RPL7P8-201ENST00000411964 730 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AC092638.1-201ENST00000411966 1275 ntBASIC2.89□□□□□ -1.95
LSM1O15116 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.89□□□□□ -1.95
LSM1O15116 AC069157.1-201ENST00000421749 137 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LSM1O15116 AL592437.1-201ENST00000443781 492 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AC009961.3-201ENST00000449832 765 ntBASIC2.89□□□□□ -1.95
LSM1O15116 MTCO2P9-201ENST00000503214 694 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AC006390.1-201ENST00000508068 283 ntBASIC2.89□□□□□ -1.95
LSM1O15116 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.89□□□□□ -1.95
LSM1O15116 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM1O15116 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM1O15116 OR10V3P-201ENST00000525712 725 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.89□□□□□ -1.95
LSM1O15116 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.89□□□□□ -1.95
LSM1O15116 AC090502.2-201ENST00000549267 280 ntBASIC2.89□□□□□ -1.95
LSM1O15116 CCNG2P1-201ENST00000549521 1000 ntBASIC2.89□□□□□ -1.95
LSM1O15116 MTCYBP27-201ENST00000555160 670 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.89□□□□□ -1.95
LSM1O15116 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.89□□□□□ -1.95
LSM1O15116 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AL606834.2-201ENST00000602954 668 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM1O15116 AP003973.1-201ENST00000604639 691 ntBASIC2.89□□□□□ -1.95
LSM1O15116 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.89□□□□□ -1.95
LSM1O15116 AP000238.1-201ENST00000608759 426 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AP005229.2-201ENST00000609980 697 ntBASIC2.89□□□□□ -1.95
LSM1O15116 VN1R74P-201ENST00000613259 503 ntBASIC2.89□□□□□ -1.95
LSM1O15116 MIR7975-201ENST00000619350 68 ntBASIC2.89□□□□□ -1.95
LSM1O15116 AC007275.1-201ENST00000621243 671 ntBASIC2.89□□□□□ -1.95
LSM1O15116 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM1O15116 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LSM1O15116 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LSM1O15116 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
LSM1O15116 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.88□□□□□ -1.95
LSM1O15116 SNORA54-201ENST00000384281 123 ntBASIC2.88□□□□□ -1.95
LSM1O15116 MIR7-3-201ENST00000384898 110 ntBASIC2.88□□□□□ -1.95
LSM1O15116 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 MTCO2P1-201ENST00000424648 477 ntBASIC2.88□□□□□ -1.95
LSM1O15116 MTCYBP15-201ENST00000433123 1127 ntBASIC2.88□□□□□ -1.95
LSM1O15116 ARL4AP4-201ENST00000434170 518 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 AC091862.1-201ENST00000438016 1100 ntBASIC2.88□□□□□ -1.95
LSM1O15116 VN1R34P-201ENST00000447387 883 ntBASIC2.88□□□□□ -1.95
LSM1O15116 USP9YP34-201ENST00000453983 808 ntBASIC2.88□□□□□ -1.95
LSM1O15116 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM1O15116 OR2A20P-203ENST00000498397 1268 ntBASIC2.88□□□□□ -1.95
LSM1O15116 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM1O15116 SNORA31.15-201ENST00000516771 132 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms