Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.53□□□□□ -2
UPK1AO00322 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.53□□□□□ -2
UPK1AO00322 RPS24P13-201ENST00000442520 397 ntBASIC2.53□□□□□ -2
UPK1AO00322 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.53□□□□□ -2
UPK1AO00322 AL353718.1-201ENST00000451028 517 ntBASIC2.53□□□□□ -2
UPK1AO00322 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.53□□□□□ -2
UPK1AO00322 RPL23AP31-201ENST00000456160 467 ntBASIC2.53□□□□□ -2
UPK1AO00322 RPS20P24-201ENST00000457473 361 ntBASIC2.53□□□□□ -2
UPK1AO00322 AL136126.1-201ENST00000473603 402 ntBASIC2.53□□□□□ -2
UPK1AO00322 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.53□□□□□ -2
UPK1AO00322 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.53□□□□□ -2
UPK1AO00322 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.53□□□□□ -2
UPK1AO00322 ZNF705CP-201ENST00000530515 889 ntBASIC2.53□□□□□ -2
UPK1AO00322 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
UPK1AO00322 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.53□□□□□ -2
UPK1AO00322 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.53□□□□□ -2
UPK1AO00322 GAS5-AS1-201ENST00000602767 694 ntBASIC2.53□□□□□ -2
UPK1AO00322 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.53□□□□□ -2
UPK1AO00322 AC068831.7-201ENST00000616954 363 ntBASIC2.53□□□□□ -2
UPK1AO00322 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
UPK1AO00322 AC244517.1-201ENST00000606030 2086 ntBASIC2.53□□□□□ -2.01
UPK1AO00322 RNU6-115P-201ENST00000364310 107 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 SNORD82-201ENST00000365530 70 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 RAP1BP1-201ENST00000412709 553 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.52□□□□□ -2.01
UPK1AO00322 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.52□□□□□ -2.01
UPK1AO00322 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.52□□□□□ -2.01
UPK1AO00322 AC107083.1-201ENST00000439643 279 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 RPL23AP16-201ENST00000441715 421 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UPK1AO00322 AL500527.1-201ENST00000448532 255 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 CACYBPP2-201ENST00000453625 678 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.52□□□□□ -2.01
UPK1AO00322 CDC42P1-201ENST00000456658 548 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.52□□□□□ -2.01
UPK1AO00322 SETP6-201ENST00000479329 568 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 MTND3P24-201ENST00000506306 329 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 MLLT10P2-201ENST00000506434 249 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UPK1AO00322 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.52□□□□□ -2.01
UPK1AO00322 AC109471.1-201ENST00000511631 612 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 AC105914.1-201ENST00000511798 226 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 RNU6-711P-201ENST00000517255 106 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
UPK1AO00322 AC126177.3-201ENST00000551839 688 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 SNRPGP1-201ENST00000553864 222 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 RN7SL622P-201ENST00000585292 275 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 BNIP3P22-201ENST00000593399 556 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.52□□□□□ -2.01
UPK1AO00322 AC005000.2-201ENST00000605468 310 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 AL110115.1-201ENST00000614396 364 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.52□□□□□ -2.01
UPK1AO00322 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
UPK1AO00322 AC009487.2-201ENST00000420969 6821 ntBASIC2.52□□□□□ -2.01
UPK1AO00322 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
UPK1AO00322 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UPK1AO00322 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
UPK1AO00322 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
UPK1AO00322 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.51□□□□□ -2.01
UPK1AO00322 TAB3P1-202ENST00000452645 1634 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
UPK1AO00322 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
UPK1AO00322 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 RNU6-730P-201ENST00000383954 104 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 RNU6-712P-201ENST00000410558 100 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.51□□□□□ -2.01
UPK1AO00322 AL133384.1-201ENST00000412744 351 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC234064.1-201ENST00000436312 247 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.51□□□□□ -2.01
UPK1AO00322 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.51□□□□□ -2.01
UPK1AO00322 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.51□□□□□ -2.01
UPK1AO00322 AC025881.1-201ENST00000518851 512 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.51□□□□□ -2.01
UPK1AO00322 SETP2-201ENST00000553886 926 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.51□□□□□ -2.01
UPK1AO00322 AC074050.1-201ENST00000563247 211 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.51□□□□□ -2.01
UPK1AO00322 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.51□□□□□ -2.01
UPK1AO00322 SNORD39.3-201ENST00000584451 71 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.51□□□□□ -2.01
UPK1AO00322 TPMTP1-201ENST00000592307 737 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC091057.2-201ENST00000602594 792 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AP001330.4-201ENST00000604350 154 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC008962.1-201ENST00000605729 304 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AC135507.2-201ENST00000612443 309 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 AL360181.4-201ENST00000621752 134 ntBASIC2.51□□□□□ -2.01
UPK1AO00322 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
UPK1AO00322 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
UPK1AO00322 ZNF849P-201ENST00000594711 1566 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 RNU6-1074P-201ENST00000383995 104 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 MTCO2P31-201ENST00000402702 684 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.5□□□□□ -2.01
UPK1AO00322 RPL17P35-201ENST00000432217 549 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.5□□□□□ -2.01
UPK1AO00322 SNRPEP4-201ENST00000435815 279 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 MTND4P15-201ENST00000437913 1033 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms