Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 SNORA26.7-201ENST00000391288 122 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AL360182.1-201ENST00000397433 468 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AL023807.1-201ENST00000407932 359 ntBASIC2.73□□□□□ -1.97
DFFAO00273 SSXP9-201ENST00000417503 292 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AL512661.1-201ENST00000434586 1253 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.73□□□□□ -1.97
DFFAO00273 RPL7P55-201ENST00000450522 746 ntBASIC2.73□□□□□ -1.97
DFFAO00273 SNORD109B-201ENST00000458961 67 ntBASIC2.73□□□□□ -1.97
DFFAO00273 SNORD109A-201ENST00000459128 67 ntBASIC2.73□□□□□ -1.97
DFFAO00273 PABPC1P3-201ENST00000469174 459 ntBASIC2.73□□□□□ -1.97
DFFAO00273 OR52A4P-202ENST00000481634 799 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AC011352.3-201ENST00000505162 593 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AC034159.1-201ENST00000513885 583 ntBASIC2.73□□□□□ -1.97
DFFAO00273 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.73□□□□□ -1.97
DFFAO00273 HMGB1P1-201ENST00000522557 636 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AC022690.1-201ENST00000526681 550 ntBASIC2.73□□□□□ -1.97
DFFAO00273 SNORD39.3-201ENST00000584451 71 ntBASIC2.73□□□□□ -1.97
DFFAO00273 RN7SL622P-201ENST00000585292 275 ntBASIC2.73□□□□□ -1.97
DFFAO00273 AL137843.1-201ENST00000605078 385 ntBASIC2.73□□□□□ -1.97
DFFAO00273 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.73□□□□□ -1.97
DFFAO00273 AC040168.1-201ENST00000623594 991 ntBASIC2.73□□□□□ -1.97
DFFAO00273 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
DFFAO00273 AL049780.3-201ENST00000624612 1583 ntBASIC2.73□□□□□ -1.97
DFFAO00273 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
DFFAO00273 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 MIR9-1-201ENST00000385198 89 ntBASIC2.72□□□□□ -1.97
DFFAO00273 U3.26-201ENST00000391236 204 ntBASIC2.72□□□□□ -1.97
DFFAO00273 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.72□□□□□ -1.97
DFFAO00273 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.72□□□□□ -1.97
DFFAO00273 RPL21P32-201ENST00000419877 477 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL606495.1-201ENST00000422100 813 ntBASIC2.72□□□□□ -1.97
DFFAO00273 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
DFFAO00273 AC079780.1-201ENST00000428259 207 ntBASIC2.72□□□□□ -1.97
DFFAO00273 SAR1AP4-201ENST00000429225 591 ntBASIC2.72□□□□□ -1.97
DFFAO00273 UBE2V1P6-201ENST00000430840 422 ntBASIC2.72□□□□□ -1.97
DFFAO00273 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 MTND2P19-201ENST00000449129 1012 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL096803.2-201ENST00000450032 677 ntBASIC2.72□□□□□ -1.97
DFFAO00273 CDC42P1-201ENST00000456658 548 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.72□□□□□ -1.97
DFFAO00273 RPS20P24-201ENST00000457473 361 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AC104472.2-201ENST00000469035 601 ntBASIC2.72□□□□□ -1.97
DFFAO00273 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 VN1R104P-201ENST00000505115 1009 ntBASIC2.72□□□□□ -1.97
DFFAO00273 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 AC100870.1-201ENST00000522035 505 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
DFFAO00273 SNRPGP16-201ENST00000533275 226 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL391156.1-201ENST00000554965 554 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.72□□□□□ -1.97
DFFAO00273 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.72□□□□□ -1.97
DFFAO00273 AC011471.1-201ENST00000585766 187 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AC023043.3-201ENST00000593113 385 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL671309.1-201ENST00000603750 544 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL035413.2-201ENST00000604801 525 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AC079791.1-201ENST00000605356 973 ntBASIC2.72□□□□□ -1.97
DFFAO00273 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.72□□□□□ -1.97
DFFAO00273 AC009318.4-201ENST00000620496 486 ntBASIC2.72□□□□□ -1.97
DFFAO00273 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.72□□□□□ -1.97
DFFAO00273 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DFFAO00273 AL136520.1-201ENST00000600311 1322 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.71□□□□□ -1.98
DFFAO00273 MIR16-2-201ENST00000362117 81 ntBASIC2.71□□□□□ -1.98
DFFAO00273 SNORA5B-201ENST00000363786 132 ntBASIC2.71□□□□□ -1.98
DFFAO00273 SNORA14A-201ENST00000364773 135 ntBASIC2.71□□□□□ -1.98
DFFAO00273 SNORD82-201ENST00000365530 70 ntBASIC2.71□□□□□ -1.98
DFFAO00273 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
DFFAO00273 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.71□□□□□ -1.98
DFFAO00273 RNU2-52P-201ENST00000410680 190 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC099677.1-201ENST00000420575 175 ntBASIC2.71□□□□□ -1.98
DFFAO00273 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.71□□□□□ -1.98
DFFAO00273 AC109583.1-201ENST00000432156 268 ntBASIC2.71□□□□□ -1.98
DFFAO00273 SNRPEP4-201ENST00000435815 279 ntBASIC2.71□□□□□ -1.98
DFFAO00273 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.71□□□□□ -1.98
DFFAO00273 RPL23AP74-201ENST00000437246 471 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.71□□□□□ -1.98
DFFAO00273 RPL23AP16-201ENST00000441715 421 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AL445669.2-201ENST00000454425 421 ntBASIC2.71□□□□□ -1.98
DFFAO00273 RPL23AP31-201ENST00000456160 467 ntBASIC2.71□□□□□ -1.98
DFFAO00273 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
DFFAO00273 DSTNP2-201ENST00000504533 515 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.71□□□□□ -1.98
DFFAO00273 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
DFFAO00273 SNORA31.8-201ENST00000516327 108 ntBASIC2.71□□□□□ -1.98
DFFAO00273 ZNF705CP-201ENST00000530515 889 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC011611.5-201ENST00000552477 578 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.71□□□□□ -1.98
DFFAO00273 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.71□□□□□ -1.98
DFFAO00273 VN1R92P-201ENST00000598511 928 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.71□□□□□ -1.98
DFFAO00273 AP001330.4-201ENST00000604350 154 ntBASIC2.71□□□□□ -1.98
DFFAO00273 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.71□□□□□ -1.98
DFFAO00273 AL359198.2-201ENST00000611836 194 ntBASIC2.71□□□□□ -1.98
DFFAO00273 AC002076.2-201ENST00000617362 122 ntBASIC2.71□□□□□ -1.98
DFFAO00273 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.71□□□□□ -1.98
DFFAO00273 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms