Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 ARPC3P1-201ENST00000437218 533 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 MTCO2P25-201ENST00000447065 681 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 Z99127.3-201ENST00000448158 395 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 UQCRHP3-201ENST00000451503 251 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AL109741.2-201ENST00000455561 343 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 SNORD121B-201ENST00000458838 81 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RPL31P50-201ENST00000471002 296 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AL049874.1-201ENST00000489560 388 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC026402.1-201ENST00000513642 170 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RNU6-276P-201ENST00000516114 96 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC087373.1-201ENST00000524920 491 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC124947.2-202ENST00000552735 133 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 MIR5186-201ENST00000577504 120 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 DNAJC19P3-201ENST00000594491 331 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC008739.2-201ENST00000597006 317 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AL445423.1-201ENST00000609941 536 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 uc_338.1-201ENST00000612113 180 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AL138478.1-201ENST00000612252 832 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC231657.1-201ENST00000624313 397 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC106858.1-201ENST00000637497 429 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMKR1H3BMG3 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 AC008669.1-201ENST00000565823 2178 ntBASIC2.39□□□□□ -2.03
SMKR1H3BMG3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RNU1-70P-201ENST00000362618 164 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RNA5SP119-201ENST00000362715 117 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RNA5SP51-201ENST00000364750 119 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RNU6-359P-201ENST00000365466 108 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RNA5SP283-201ENST00000365604 119 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 SNORA46-201ENST00000384762 135 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 MIR325-201ENST00000385260 98 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL449283.1-202ENST00000418249 604 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL365496.1-201ENST00000426885 215 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 OR4K11P-201ENST00000431829 904 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL512844.2-201ENST00000433990 593 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC244505.4-201ENST00000434905 287 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 SSXP5-201ENST00000443473 287 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RPL21P89-201ENST00000444021 467 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 Z96811.1-201ENST00000445880 108 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 CYCSP35-201ENST00000451978 304 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 BX322784.1-201ENST00000455793 1077 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL135752.1-201ENST00000479477 471 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC009901.1-201ENST00000506703 541 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 POU5F1P7-201ENST00000508759 541 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 TTC39CP1-201ENST00000512513 755 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC092593.2-201ENST00000513866 913 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 SNORA19.3-201ENST00000516165 130 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 RNU6-714P-201ENST00000516963 103 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC005476.1-201ENST00000554427 397 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL132857.1-201ENST00000555180 708 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AADACP1-206ENST00000561502 1193 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC006116.10-201ENST00000591836 581 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC010620.2-201ENST00000600135 313 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 BNIP3P26-201ENST00000600827 554 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC021749.1-201ENST00000604322 607 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 BNIP3P31-201ENST00000604515 566 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC005962.2-201ENST00000611427 652 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC079597.1-201ENST00000624306 508 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AL159972.1-201ENST00000625150 448 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 MIR4275-201ENST00000636486 87 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 AC008264.2-201ENST00000610193 3731 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMKR1H3BMG3 OR4G2P-202ENST00000641004 1759 ntBASIC2.38□□□□□ -2.03
SMKR1H3BMG3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms