Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR3186-201ENST00000577404 85 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL159169.2-201ENST00000610061 1269 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL118508.4-201ENST00000624142 1176 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC093591.3-201ENST00000634516 308 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 U6.98-201ENST00000637157 84 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 LRRC77P-213ENST00000637727 880 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 RNU6-225P-201ENST00000384613 103 ntBASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AL590004.2-201ENST00000404787 371 ntBASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 AP001542.2-201ENST00000593141 364 ntBASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 HMGN2P28-201ENST00000606102 262 ntBASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
COL6A6A6NMZ7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 RNU4-74P-201ENST00000411280 161 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 RPS4XP11-201ENST00000446897 772 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 RN7SKP234-201ENST00000517173 224 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 AP001207.1-201ENST00000524051 481 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 EIF1AXP2-201ENST00000555940 413 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 AC034236.3-201ENST00000605999 461 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 AC120053.1-201ENST00000607706 736 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 BX664608.1-201ENST00000610519 487 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 MIR6895-201ENST00000613497 78 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 MAPK10-266ENST00000641066 6555 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
COL6A6A6NMZ7 RNA5SP190-201ENST00000365222 118 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 DEFA7P-201ENST00000382676 285 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AL354719.1-201ENST00000406535 843 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 NDUFB4P5-201ENST00000415445 361 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 RPL7P53-201ENST00000421245 739 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AL392003.1-201ENST00000434394 243 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 Z73417.1-201ENST00000447373 778 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AL137159.1-201ENST00000452808 512 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 RPL12P25-201ENST00000455592 494 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC135279.1-201ENST00000543493 504 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC010546.1-201ENST00000569391 485 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC012182.1-201ENST00000570133 895 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC107294.3-201ENST00000609211 526 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 RMST_2.1-201ENST00000617263 136 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 AC110792.3-201ENST00000595906 1614 ntBASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.84□□□□□ -2.12
COL6A6A6NMZ7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AL590623.1-201ENST00000427864 105 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AL645939.1-201ENST00000453429 797 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 RAC1P5-201ENST00000512182 576 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC117525.1-201ENST00000515228 503 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 snoZ278.1-201ENST00000517059 112 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC025881.1-201ENST00000518851 512 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 IGHV3-76-201ENST00000522465 295 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AL389895.1-201ENST00000554127 252 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC084035.1-201ENST00000634543 607 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC007342.9-201ENST00000623877 1385 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC091152.2-201ENST00000591628 2569 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC093084.1-201ENST00000424233 687 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 TPTE2P1-204ENST00000435256 593 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 YWHAZP7-201ENST00000436906 631 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC009237.8-201ENST00000445492 379 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 CEACAMP4-201ENST00000457676 421 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC004263.1-201ENST00000479327 332 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 PCNAP1-201ENST00000505363 709 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 AC023043.3-201ENST00000593113 385 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 LINC00216-201ENST00000623548 1126 ntBASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.83□□□□□ -2.12
COL6A6A6NMZ7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 DHFRP5-201ENST00000406944 564 ntBASIC1.82□□□□□ -2.12
COL6A6A6NMZ7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms