Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 snoZ278.1-201ENST00000517059 112 ntBASIC2.57□□□□□ -2
RGPD3A6NKT7 OR4R2P-201ENST00000530815 597 ntBASIC2.57□□□□□ -2
RGPD3A6NKT7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.57□□□□□ -2
RGPD3A6NKT7 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
RGPD3A6NKT7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
RGPD3A6NKT7 API5P2-201ENST00000397055 1498 ntBASIC2.57□□□□□ -2
RGPD3A6NKT7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RGPD3A6NKT7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RGPD3A6NKT7 MTND5P7-201ENST00000413558 1798 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.56□□□□□ -2
RGPD3A6NKT7 RPS15AP12-201ENST00000419498 388 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.56□□□□□ -2
RGPD3A6NKT7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.56□□□□□ -2
RGPD3A6NKT7 MLLT10P2-201ENST00000506434 249 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.56□□□□□ -2
RGPD3A6NKT7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.56□□□□□ -2
RGPD3A6NKT7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.56□□□□□ -2
RGPD3A6NKT7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.56□□□□□ -2
RGPD3A6NKT7 MIR4303-201ENST00000581299 66 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AC010329.2-201ENST00000595195 2737 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.56□□□□□ -2
RGPD3A6NKT7 AC006378.2-201ENST00000623178 2476 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 CYP3A51P-201ENST00000633513 256 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
RGPD3A6NKT7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RGPD3A6NKT7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RGPD3A6NKT7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 SNORA51.11-201ENST00000384442 131 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 HMGB1P13-201ENST00000406019 642 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 MIR1276-201ENST00000408707 83 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AL358453.1-201ENST00000422522 250 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 SNX5P1-201ENST00000505757 1041 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AC025881.1-201ENST00000518851 512 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.56□□□□□ -2
RGPD3A6NKT7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.56□□□□□ -2
RGPD3A6NKT7 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 OR4T1P-201ENST00000554933 911 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 MIR4716-201ENST00000579628 84 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AC007687.1-201ENST00000602704 304 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 ABI1P1-201ENST00000603375 1120 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 AC005156.1-201ENST00000613371 573 ntBASIC2.56□□□□□ -2
RGPD3A6NKT7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.56□□□□□ -2
RGPD3A6NKT7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RGPD3A6NKT7 RNA5SP167-201ENST00000365461 116 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 AL021407.1-201ENST00000404531 386 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.55□□□□□ -2
RGPD3A6NKT7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.55□□□□□ -2
RGPD3A6NKT7 MTCO1P42-201ENST00000457379 726 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 SNORD108-201ENST00000459332 71 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 AC006483.1-201ENST00000487308 313 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 RNA5SP480-201ENST00000516840 109 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.55□□□□□ -2
RGPD3A6NKT7 HMGB1P1-201ENST00000522557 636 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.55□□□□□ -2
RGPD3A6NKT7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.55□□□□□ -2
RGPD3A6NKT7 AC020895.1-201ENST00000595362 272 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.55□□□□□ -2
RGPD3A6NKT7 AL160237.3-201ENST00000604114 1013 ntBASIC2.55□□□□□ -2
RGPD3A6NKT7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RGPD3A6NKT7 AL591719.1-201ENST00000444669 744 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.54□□□□□ -2
RGPD3A6NKT7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.54□□□□□ -2
RGPD3A6NKT7 CR382285.2-201ENST00000624662 1495 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RGPD3A6NKT7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.54□□□□□ -2
RGPD3A6NKT7 DCAF13P1-201ENST00000495256 1330 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 AC005005.2-201ENST00000420779 380 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.54□□□□□ -2
RGPD3A6NKT7 MAGOH2P-202ENST00000584384 429 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 AC084768.2-201ENST00000622736 221 ntBASIC2.54□□□□□ -2
RGPD3A6NKT7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
RGPD3A6NKT7 U3.15-201ENST00000365398 212 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 RNU2-37P-201ENST00000410695 177 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.53□□□□□ -2
RGPD3A6NKT7 MTND2P2-201ENST00000434633 945 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.53□□□□□ -2
RGPD3A6NKT7 RPS29P11-201ENST00000496507 171 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.53□□□□□ -2
RGPD3A6NKT7 AC010872.1-201ENST00000624225 675 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
RGPD3A6NKT7 AP001486.2-201ENST00000561652 5113 ntBASIC2.53□□□□□ -2
RGPD3A6NKT7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2.01
RGPD3A6NKT7 AC027514.1-201ENST00000588561 1603 ntBASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.52□□□□□ -2.01
RGPD3A6NKT7 TMEM248P1-201ENST00000510579 951 ntBASIC2.52□□□□□ -2.01
RGPD3A6NKT7 AP004242.1-201ENST00000533701 349 ntBASIC2.52□□□□□ -2.01
RGPD3A6NKT7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms