Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC115283.1-201ENST00000427353 400 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 OR6D1P-201ENST00000436165 939 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 HMGB1P12-201ENST00000438594 598 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 Z98949.2-201ENST00000440996 144 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC092451.1-201ENST00000480211 153 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC022215.1-201ENST00000481770 362 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RN7SL283P-201ENST00000489055 303 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 DEFB109F-201ENST00000491870 277 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC110794.1-201ENST00000505816 425 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 PGAM1P13-201ENST00000507497 754 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC096745.1-201ENST00000509945 370 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNU6-475P-201ENST00000516073 104 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNA5SP228-201ENST00000516232 133 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNA5SP438-201ENST00000516561 112 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNU6-699P-201ENST00000517081 110 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 SNORD116.3-201ENST00000517176 78 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AP006587.4-201ENST00000526053 529 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC113195.1-201ENST00000579952 141 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC005899.2-201ENST00000584353 90 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AL138895.2-201ENST00000603019 178 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AP005431.1-201ENST00000618479 319 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC243312.2-201ENST00000623340 601 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 MIR1910-201ENST00000636955 80 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AL732372.2-225ENST00000642124 456 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC005592.1-201ENST00000566527 1640 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 GVINP1-202ENST00000531871 7271 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AL158163.1-201ENST00000603915 1649 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RNU6-1222P-201ENST00000384615 107 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RNU6-178P-201ENST00000384631 104 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC110754.1-201ENST00000399740 601 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC099677.1-201ENST00000420575 175 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RPS27AP12-201ENST00000429552 465 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RPL12P46-201ENST00000436610 195 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 NEFMP1-201ENST00000443423 1006 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RPL31P60-201ENST00000478450 367 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RN7SL101P-201ENST00000496350 279 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RNU6-635P-201ENST00000516651 102 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 RNU6-264P-201ENST00000517134 104 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 CYCSP38-201ENST00000559840 322 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC092121.1-201ENST00000569452 202 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC067852.3-201ENST00000589177 561 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC100812.1-201ENST00000607622 580 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 SRRM1P3-201ENST00000426911 2678 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 AP001642.1-201ENST00000624727 2117 ntBASIC4.66□□□□□ -1.66
SHISA3A0PJX4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHISA3A0PJX4 BTBD10P1-201ENST00000549824 1352 ntBASIC4.65□□□□□ -1.66
SHISA3A0PJX4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHISA3A0PJX4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHISA3A0PJX4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.65□□□□□ -1.66
SHISA3A0PJX4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.65□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.153-201ENST00000363615 91 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 SNORA23-201ENST00000365128 182 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 RNU6-784P-201ENST00000384330 106 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 MIR589-201ENST00000385238 99 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.65□□□□□ -1.67
SHISA3A0PJX4 OR2AH1P-201ENST00000425717 928 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 HMGN1P2-201ENST00000445197 310 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.65□□□□□ -1.67
SHISA3A0PJX4 IGHV5-78-201ENST00000450948 295 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms