Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 RPL23AP31-201ENST00000456160 467 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AP001486.1-201ENST00000463339 476 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 RPS4XP6-201ENST00000477670 797 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 SEM1P1-201ENST00000506694 209 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AC034159.1-201ENST00000513885 583 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 RNA5SP356-201ENST00000515972 94 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AP003102.1-201ENST00000525638 661 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 MIR4319-201ENST00000577285 85 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AP000787.2-201ENST00000604432 568 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AL162233.1-201ENST00000620014 944 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 CR381653.2-201ENST00000624041 768 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 MTND2P41-201ENST00000637599 773 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.09□□□□□ -2.08
TRAV41A0A0B4J266 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.09□□□□□ -2.08
TRAV41A0A0B4J266 AP000526.1-201ENST00000603308 1388 ntBASIC2.09□□□□□ -2.08
TRAV41A0A0B4J266 FAM35BP-202ENST00000497389 3337 ntBASIC2.09□□□□□ -2.08
TRAV41A0A0B4J266 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC026241.1-201ENST00000517873 2142 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 MIR196B-201ENST00000384852 84 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AL590004.2-201ENST00000404787 371 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 RNU2-25P-201ENST00000411041 191 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 RNA5SP184-201ENST00000411071 108 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC073310.1-201ENST00000423226 1033 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC096632.1-201ENST00000427395 310 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AL590762.3-201ENST00000436372 640 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC006445.2-201ENST00000510061 472 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC022784.5-201ENST00000522241 437 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC010620.2-201ENST00000600135 313 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 U73023.1-201ENST00000603134 700 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC025588.3-201ENST00000604182 274 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AC092608.2-201ENST00000624427 218 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 SEC63P2-201ENST00000503863 1939 ntBASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRAV41A0A0B4J266 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 ZNF519P1-201ENST00000449011 1626 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 SNORD62.1-201ENST00000362541 86 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 RNU5D-1-201ENST00000363299 116 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 RNVU1-3-201ENST00000364313 161 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-1180P-201ENST00000364935 107 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 SNORD21-201ENST00000383953 95 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MIR23A-201ENST00000385245 73 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AL137014.1-201ENST00000420490 1226 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 FNDC3CP-201ENST00000420795 1155 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC009237.2-201ENST00000421358 284 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 RPP40P1-201ENST00000426762 456 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MTND4LP7-201ENST00000431728 294 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC007000.2-201ENST00000442564 487 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MRPL50P4-201ENST00000446432 475 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AP000936.2-201ENST00000447151 681 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 GSTA11P-201ENST00000452866 669 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 RNU6-775P-201ENST00000459318 96 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC004924.1-201ENST00000480160 781 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AL049873.1-201ENST00000480540 376 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC103975.1-201ENST00000482506 483 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 MLLT10P2-201ENST00000506434 249 ntBASIC2.07□□□□□ -2.08
TRAV41A0A0B4J266 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms