Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC027290.2-201ENST00000623210 18662 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 Y_RNA.9-201ENST00000362354 101 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RNU6-181P-201ENST00000363225 107 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RNU6-1283P-201ENST00000365314 105 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RPS16P5-201ENST00000406501 404 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RNU2-47P-201ENST00000410649 186 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 HMGN1P24-201ENST00000412282 298 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RPL26P29-201ENST00000415623 438 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC019097.1-201ENST00000424783 735 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 DPPA2P1-201ENST00000428060 556 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC073464.1-201ENST00000429823 534 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 FCF1P1-201ENST00000432690 571 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 H2AFZP6-201ENST00000444403 394 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RAC1P7-201ENST00000445367 377 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 FABP3P2-201ENST00000453169 399 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC006463.2-201ENST00000473326 348 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC083829.1-201ENST00000503756 657 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC019235.1-201ENST00000503847 207 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AK3P4-201ENST00000504283 583 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RNU6-445P-201ENST00000516949 107 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 OR4R3P-201ENST00000525084 838 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 CR383656.7-201ENST00000548164 174 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 MIR3167-201ENST00000579623 85 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 IGHV3-29-201ENST00000604817 344 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 MIR98-201ENST00000606724 119 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC233309.1-201ENST00000619522 751 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC091905.1-201ENST00000624400 311 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AL159972.1-201ENST00000625150 448 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 AC010300.1-201ENST00000600671 5134 ntBASIC4.41□□□□□ -1.7
PCDHA3Q9Y5H8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHA3Q9Y5H8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 Y_RNA.1-201ENST00000352915 104 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RNU6-263P-201ENST00000363811 107 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 Y_RNA.372-201ENST00000365599 102 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MIR19A-201ENST00000384878 82 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 CALM2P3-201ENST00000400429 449 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC092447.6-201ENST00000414578 210 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC119751.6-201ENST00000416712 186 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC069157.1-201ENST00000421749 137 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL391219.1-201ENST00000422570 483 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC119618.1-201ENST00000434191 222 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 TIMM9P1-201ENST00000436122 256 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC093156.1-201ENST00000440382 670 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MTATP6P30-201ENST00000443540 664 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 PHBP16-201ENST00000446318 950 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RPL38P1-201ENST00000460914 211 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RN7SL98P-201ENST00000462271 300 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RPS7P7-201ENST00000463499 571 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MTCO3P38-201ENST00000468910 766 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL121769.1-201ENST00000469473 401 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RPS29P19-201ENST00000479709 171 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RPS3AP14-201ENST00000483907 780 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 MTAPP1-201ENST00000489154 819 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC007182.2-201ENST00000489251 402 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AL592156.1-201ENST00000508758 304 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 RNU6-718P-201ENST00000516166 105 ntBASIC4.4□□□□□ -1.71
PCDHA3Q9Y5H8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms