Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MTATP6P4-201ENST00000427725 675 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 ISCA1P6-201ENST00000427740 390 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 VDAC1P3-201ENST00000434069 851 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 MTND1P34-201ENST00000438556 671 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AL138799.3-201ENST00000438968 350 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 CBX1P1-201ENST00000440184 427 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 USP9YP15-201ENST00000442391 422 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 MTCYBP1-201ENST00000454315 1119 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 SNRPGP5-201ENST00000456003 220 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 MTCO2P29-201ENST00000465212 189 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC010618.1-201ENST00000469924 477 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC104763.1-201ENST00000475274 360 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 PARP4P3-201ENST00000510265 317 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 SNORA31.8-201ENST00000516327 108 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 SNRPGP16-201ENST00000533275 226 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC022880.1-201ENST00000534017 973 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC068831.4-201ENST00000556118 109 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC084783.1-201ENST00000565846 910 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 ZNF415P1-201ENST00000582279 1166 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC008638.3-201ENST00000603341 463 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AL161729.4-201ENST00000604650 476 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AL451086.1-201ENST00000605596 223 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC098614.4-201ENST00000607601 462 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC087241.4-201ENST00000612441 480 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC008121.2-201ENST00000614647 523 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AL359740.1-201ENST00000624340 592 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 AC027290.2-201ENST00000623210 18662 ntBASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
LSM4Q9Y4Z0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
LSM4Q9Y4Z0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC068254.2-201ENST00000623938 3577 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RNU5E-1-201ENST00000362477 120 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 Y_RNA.126-201ENST00000363382 111 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RNY3P13-201ENST00000365542 102 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RNU6-259P-201ENST00000383999 107 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 BX295541.1-201ENST00000417774 250 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 PIGFP2-201ENST00000421400 651 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC024082.2-201ENST00000434771 238 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 ELOCP30-201ENST00000447108 299 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AL162389.1-201ENST00000449233 177 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 ABCF2P2-201ENST00000450549 296 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC138853.1-201ENST00000503549 823 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 KCTD9P5-201ENST00000504141 1170 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 MTND2P33-201ENST00000506452 1031 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RNU6-720P-201ENST00000516363 108 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 RNU6-430P-201ENST00000517078 107 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 SNORA31.22-201ENST00000517204 135 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 DUXAP2-201ENST00000519198 589 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 MTCYBP20-201ENST00000524239 1129 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 PHBP17-201ENST00000528576 541 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 CCNG2P1-201ENST00000549521 1000 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AL391156.1-201ENST00000554965 554 ntBASIC3.52□□□□□ -1.85
LSM4Q9Y4Z0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms