Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATG4BQ9Y4P1 ZNF876P-202ENST00000398732 1485 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 ZNF542P-204ENST00000482727 1305 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 OR4G11P-202ENST00000642116 1414 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 OR5H2-201ENST00000355273 945 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR208A-201ENST00000362287 71 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 RNA5SP197-201ENST00000363357 119 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 RN7SKP111-201ENST00000410349 271 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL137014.1-201ENST00000420490 1226 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MTCO2P5-201ENST00000422621 426 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MTCYBP34-201ENST00000439552 670 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC097262.1-201ENST00000452559 548 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC010468.1-201ENST00000461022 817 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC010587.2-201ENST00000511727 448 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC006499.2-201ENST00000513470 337 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 NBEAP1-201ENST00000554452 979 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL391156.1-201ENST00000554965 554 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR4425-201ENST00000580572 84 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC006557.5-201ENST00000603126 811 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL158042.1-201ENST00000605338 460 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC006270.3-201ENST00000605967 1036 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC097478.2-201ENST00000610572 514 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC092106.3-201ENST00000611308 722 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AL110115.1-201ENST00000614396 364 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR7975-201ENST00000619350 68 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC127502.3-201ENST00000636170 1206 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 MIR7153-201ENST00000637758 57 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
ATG4BQ9Y4P1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 DHFRP6-201ENST00000401776 268 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL136372.1-201ENST00000403060 228 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL356131.1-201ENST00000405826 414 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MTATP6P27-201ENST00000416987 621 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MTCO2P17-201ENST00000424336 677 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MTCO1P39-201ENST00000426148 480 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL590233.1-201ENST00000430017 456 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC004866.2-201ENST00000438285 481 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MTND3P1-201ENST00000441336 220 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 HSPE1P28-201ENST00000443139 211 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 MTCO3P11-201ENST00000455103 774 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 snoU13.22-201ENST00000459428 104 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 SNRPGP16-201ENST00000533275 226 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 AC011468.4-201ENST00000603942 409 ntBASIC3.21□□□□□ -1.9
ATG4BQ9Y4P1 ELOCP35-201ENST00000604289 336 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms