Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 RPS18P6-201ENST00000476880 458 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC008526.1-201ENST00000509149 338 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AP002404.1-201ENST00000532005 451 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC135001.1-201ENST00000544546 283 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 RN7SL802P-201ENST00000577858 299 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AL138726.1-201ENST00000614873 333 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC103705.1-201ENST00000619013 241 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 PLCE1P1-201ENST00000622094 305 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC093775.1-201ENST00000624154 1868 ntBASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.28□□□□□ -1.56
AP4E1Q9UPM8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 RNU6-593P-201ENST00000364716 112 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 SNORA24.1-201ENST00000384401 135 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 RNY1P14-201ENST00000384426 108 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.576-201ENST00000384781 102 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 U3.36-201ENST00000408418 213 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 RNU4-46P-201ENST00000410818 138 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AL031736.2-201ENST00000426573 787 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 RN7SL441P-201ENST00000492388 296 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 SNRPCP2-201ENST00000504370 475 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 ENPP7P11-201ENST00000505915 627 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC090022.1-201ENST00000546569 311 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AL133153.1-201ENST00000557756 303 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 NDUFB4P11-201ENST00000560510 395 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 MTCO3P23-201ENST00000561363 289 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC093591.2-201ENST00000565254 3843 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 PRR13P7-201ENST00000605538 430 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 DUSP12P1-201ENST00000612874 516 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AC011755.1-201ENST00000623763 2049 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 AL136313.1-201ENST00000624804 202 ntBASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
AP4E1Q9UPM8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC114947.2-201ENST00000565748 2125 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.153-201ENST00000363615 91 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RNU6-1243P-201ENST00000364028 107 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RNU5E-6P-201ENST00000365574 115 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 SNORA75B-201ENST00000384053 137 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 Y_RNA.574-201ENST00000384766 95 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RNU4-6P-201ENST00000410804 122 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 DDX39BP1-205ENST00000422507 192 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 PDSS1P1-201ENST00000422953 1114 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RPL7P46-201ENST00000425129 740 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC096644.2-201ENST00000429278 159 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RPL23AP89-201ENST00000439324 255 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AL353691.1-201ENST00000451332 387 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC097484.1-201ENST00000471148 389 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC010350.1-201ENST00000504908 231 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 MRPS35P2-201ENST00000508242 191 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC011411.1-201ENST00000509592 876 ntBASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.26□□□□□ -1.57
AP4E1Q9UPM8 RNU6-189P-201ENST00000516120 101 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms