Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 FNDC3CP-201ENST00000420795 1155 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 MTCO2P17-201ENST00000424336 677 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC019097.1-201ENST00000424783 735 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC063976.3-201ENST00000426849 329 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC093663.2-201ENST00000484625 313 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 MTND5P4-201ENST00000514978 288 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 VN1R92P-201ENST00000598511 928 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 RPL23AP78-201ENST00000599928 470 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 U73023.1-201ENST00000603134 700 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AL035413.2-201ENST00000604801 525 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC106900.2-201ENST00000604994 317 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 SNHG22-203ENST00000617833 660 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC079228.1-201ENST00000624774 1049 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC244517.1-201ENST00000606030 2086 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL672167.1-206ENST00000356293 943 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 MIR34A-201ENST00000385130 110 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 RNU6-821P-201ENST00000390995 107 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL139039.1-201ENST00000401900 692 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL162578.1-201ENST00000406202 378 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL513477.1-202ENST00000417061 214 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL137014.1-201ENST00000420490 1226 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC133134.1-201ENST00000466800 359 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC015724.1-201ENST00000478577 156 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 RPS27P27-201ENST00000498779 255 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 VN1R104P-201ENST00000505115 1009 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 MLLT10P2-201ENST00000506434 249 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 PRELID3BP4-201ENST00000515476 571 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 NOP56P3-201ENST00000549457 385 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC126177.3-201ENST00000551839 688 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 EIF1AXP2-201ENST00000555940 413 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 LARP7P3-201ENST00000579888 337 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC010620.2-201ENST00000600135 313 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC022387.2-201ENST00000604050 448 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL033523.1-201ENST00000605153 153 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 MIR7106-201ENST00000612419 65 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AL121594.5-201ENST00000631724 573 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 MTND2P41-201ENST00000637599 773 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 AC017104.5-201ENST00000637647 639 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 BX649567.1-201ENST00000642071 1134 ntBASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VPS29Q9UBQ0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 RNU6-444P-201ENST00000383988 108 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 SNORA11.1-201ENST00000408133 129 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 RNU6-712P-201ENST00000410558 100 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC010881.1-201ENST00000433830 235 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC025750.2-201ENST00000442609 450 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AP005205.1-201ENST00000563503 508 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AP000787.2-201ENST00000604432 568 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 OR2AS2P-201ENST00000606902 342 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC006386.2-201ENST00000624491 75 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC012005.1-201ENST00000624575 75 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 AC026241.1-201ENST00000517873 2142 ntBASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
VPS29Q9UBQ0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VPS29Q9UBQ0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms