Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 SETP7-201ENST00000552169 453 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 MTND1P15-201ENST00000579262 949 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC009977.1-201ENST00000586015 570 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC055876.5-201ENST00000605667 259 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC011816.2-201ENST00000607089 556 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC092354.2-201ENST00000607786 514 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC026368.1-201ENST00000614934 690 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC026585.1-201ENST00000619582 524 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC092125.1-201ENST00000562568 1995 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC068254.2-201ENST00000623938 3577 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC090337.1-201ENST00000579651 2074 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL20A1Q9P218 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL20A1Q9P218 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.4□□□□□ -1.7
COL20A1Q9P218 RNU6-989P-201ENST00000362756 107 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 SNORD3H-201ENST00000384486 214 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 MIR199A2-201ENST00000385289 110 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 RPS20P2-201ENST00000402520 389 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 FCF1P10-201ENST00000407590 479 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 SNORA57.3-201ENST00000411095 141 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC244505.5-201ENST00000443639 207 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 RPS17P13-201ENST00000448974 407 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 MTND1P9-201ENST00000453775 944 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 UBDP1-202ENST00000457888 382 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 snoU13.3-201ENST00000459441 104 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 RPL23AP41-201ENST00000484754 458 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC022880.1-201ENST00000534017 973 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 RPL21P5-201ENST00000554662 472 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC245505.1-201ENST00000556398 224 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC244505.7-201ENST00000599675 272 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC025165.5-201ENST00000602802 578 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC015871.2-201ENST00000603605 948 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 OR10AB1P-201ENST00000609613 938 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC005332.10-201ENST00000612725 619 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL158196.1-201ENST00000616786 434 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AC079684.1-201ENST00000621405 437 ntBASIC4.4□□□□□ -1.71
COL20A1Q9P218 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL20A1Q9P218 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.71
COL20A1Q9P218 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 MIR124-3-201ENST00000384866 87 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 RNU6-248P-201ENST00000410720 107 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 HMGB3P23-201ENST00000414981 585 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 SYF2P2-201ENST00000417620 583 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AL391219.1-201ENST00000422570 483 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 AL591419.1-201ENST00000427423 339 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 AC073614.1-201ENST00000438690 650 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 RABEPKP1-201ENST00000440529 1026 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 TPT1P7-201ENST00000458300 517 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 RPL21P11-201ENST00000461458 483 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AC091153.1-201ENST00000466297 402 ntBASIC4.39□□□□□ -1.71
COL20A1Q9P218 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.39□□□□□ -1.71
COL20A1Q9P218 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL20A1Q9P218 NDUFB4P2-201ENST00000509515 391 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 255.3 ms