Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VAPAQ9P0L0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 SNORA71.3-201ENST00000362582 128 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 RNU6-173P-201ENST00000364215 104 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 RNA5SP72-201ENST00000364442 117 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 MIR1289-1-201ENST00000408836 144 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AL158050.1-201ENST00000416077 457 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AL096701.2-201ENST00000416920 238 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 TMEM167AP1-201ENST00000423409 219 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 ST13P20-201ENST00000447996 1065 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AL096803.2-201ENST00000450032 677 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 PRSS3P4-201ENST00000453323 162 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC008571.1-201ENST00000467232 300 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AP001025.2-201ENST00000490908 477 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 DSTNP2-201ENST00000504533 515 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 RNU6-1095P-201ENST00000516148 108 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 SNORA74D-201ENST00000516404 141 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC011611.5-201ENST00000552477 578 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 RN7SL622P-201ENST00000585292 275 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 GLUD1P4-201ENST00000590914 418 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC245036.5-201ENST00000596330 847 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC133794.1-201ENST00000602731 914 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AL513185.3-201ENST00000433335 1300 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 FAM35BP-202ENST00000497389 3337 ntBASIC2.6□□□□□ -1.99
VAPAQ9P0L0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VAPAQ9P0L0 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 MIR592-201ENST00000384959 97 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AL024474.1-201ENST00000404655 591 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AL356967.1-201ENST00000406305 431 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 BX682237.1-201ENST00000415016 335 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AL513175.2-201ENST00000422071 443 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC022018.1-201ENST00000430685 241 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC005345.1-201ENST00000431868 217 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 MTCO3P43-201ENST00000440974 771 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC112492.1-201ENST00000449607 712 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 RPL7P55-201ENST00000450522 746 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 GTF2IP12-201ENST00000456547 356 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 CDC42P1-201ENST00000456658 548 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 snoU109.4-201ENST00000458953 143 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AL358832.1-201ENST00000497800 389 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AIG1P1-201ENST00000503376 148 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC083906.5-201ENST00000503722 328 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC048346.1-201ENST00000510247 144 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 H3F3AP1-201ENST00000559984 334 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC138761.3-201ENST00000579993 334 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC024153.1-201ENST00000603103 365 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 AC010738.1-201ENST00000604970 987 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
VAPAQ9P0L0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.59□□□□□ -1.99
VAPAQ9P0L0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
VAPAQ9P0L0 AC109315.1-201ENST00000584143 1347 ntBASIC2.59□□□□□ -2
VAPAQ9P0L0 MTND4P21-201ENST00000453886 1357 ntBASIC2.59□□□□□ -2
VAPAQ9P0L0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
VAPAQ9P0L0 AC006378.2-201ENST00000623178 2476 ntBASIC2.59□□□□□ -2
VAPAQ9P0L0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.59□□□□□ -2
VAPAQ9P0L0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.58□□□□□ -2
VAPAQ9P0L0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.58□□□□□ -2
VAPAQ9P0L0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
VAPAQ9P0L0 MIR16-2-201ENST00000362117 81 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 RNU6-792P-201ENST00000363490 107 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 OR1L1-202ENST00000373686 1083 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AL139098.1-201ENST00000407291 389 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 MTND3P20-201ENST00000407663 186 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.58□□□□□ -2
VAPAQ9P0L0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.58□□□□□ -2
VAPAQ9P0L0 RSL24D1P8-201ENST00000434442 492 ntBASIC2.58□□□□□ -2
VAPAQ9P0L0 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms