Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL590240.3-201ENST00000621416 943 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AL732372.2-225ENST00000642124 456 ntBASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMARCAL1Q9NZC9 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 MTND4P4-201ENST00000439033 1366 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RNU5F-6P-201ENST00000362979 116 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-289P-201ENST00000364093 107 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 SNORA75-201ENST00000384158 137 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-1226P-201ENST00000384317 107 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 Y_RNA.517-201ENST00000384551 106 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AL590704.1-201ENST00000402856 794 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RNU2-21P-201ENST00000410368 188 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AL133384.1-201ENST00000412744 351 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RPS3AP9-201ENST00000417027 792 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RPS29P7-201ENST00000439662 171 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RPS26P56-201ENST00000444468 240 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 CDC27P1-201ENST00000445384 715 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 RNA5SP269-201ENST00000459032 137 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 MIR2276-201ENST00000516886 89 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC009101.1-201ENST00000568135 242 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 MIR3160-1-201ENST00000577972 85 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 MTND1P15-201ENST00000579262 949 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LLPHP1-201ENST00000603571 367 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC027807.2-201ENST00000616099 408 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 MIR6864-201ENST00000617935 70 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC073968.1-201ENST00000618594 637 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC068722.2-201ENST00000618734 544 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC022149.2-201ENST00000621061 203 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AL354798.1-201ENST00000622505 329 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC068647.1-201ENST00000489539 2265 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SMARCAL1Q9NZC9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 Y_RNA.97-201ENST00000363094 102 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RNU6-1243P-201ENST00000364028 107 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RNA5SP515-201ENST00000364570 118 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 MIR30B-201ENST00000384850 88 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC025750.1-201ENST00000399891 379 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC069218.2-201ENST00000411665 344 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AL389915.1-201ENST00000422463 466 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RPL21P133-201ENST00000443666 476 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC026410.2-201ENST00000460281 156 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC091564.1-201ENST00000464563 479 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC017015.1-201ENST00000477387 286 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RN7SL132P-201ENST00000478131 296 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RPL21P103-201ENST00000479921 488 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AL139099.1-201ENST00000497398 403 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC114981.1-201ENST00000503897 678 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RNA5SP216-201ENST00000516111 123 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms