Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC015871.2-201ENST00000603605 948 ntBASIC4.61□□□□□ -1.67
DDX56Q9NY93 AC020634.1-201ENST00000608701 549 ntBASIC4.61□□□□□ -1.67
DDX56Q9NY93 AC122108.2-201ENST00000611946 526 ntBASIC4.61□□□□□ -1.67
DDX56Q9NY93 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.61□□□□□ -1.67
DDX56Q9NY93 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX56Q9NY93 MIR6891-201ENST00000618788 93 ntBASIC4.61□□□□□ -1.67
DDX56Q9NY93 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX56Q9NY93 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.61□□□□□ -1.67
DDX56Q9NY93 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
DDX56Q9NY93 MARK2P15-201ENST00000432204 2186 ntBASIC4.61□□□□□ -1.67
DDX56Q9NY93 AC008568.2-201ENST00000623862 2313 ntBASIC4.61□□□□□ -1.67
DDX56Q9NY93 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.61□□□□□ -1.67
DDX56Q9NY93 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 RNU5E-1-201ENST00000362477 120 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 RNU5A-6P-201ENST00000384136 116 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 SNORA70F-201ENST00000384142 135 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 MIR550A3-201ENST00000390735 95 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 PPIAP31-201ENST00000405422 495 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 RPS20P20-201ENST00000460498 340 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 RN7SL812P-201ENST00000493791 279 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 NDUFA5P12-201ENST00000503796 343 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 VWA8P1-201ENST00000510889 176 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 RNA5SP337-201ENST00000517007 109 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 FAM60DP-201ENST00000524174 632 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 MIR4270-201ENST00000581799 70 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC069061.3-201ENST00000582254 823 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 BNIP3P33-201ENST00000598912 569 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC106900.2-201ENST00000604994 317 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 NDUFA8P1-201ENST00000605525 367 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 FAM25E-202ENST00000608562 189 ntBASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
DDX56Q9NY93 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
DDX56Q9NY93 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
DDX56Q9NY93 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
DDX56Q9NY93 MIR3065-201ENST00000390137 79 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 LAP3P1-201ENST00000403648 294 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 MIR1911-201ENST00000410783 80 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 ZNF885P-201ENST00000420174 1098 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 UQCRBP1-201ENST00000421129 336 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL360081.1-201ENST00000428299 555 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL132765.1-201ENST00000434165 553 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL138878.2-201ENST00000440581 1241 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL662791.1-201ENST00000441992 928 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 RPS23P3-201ENST00000470993 430 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 SNORA70.16-201ENST00000516390 95 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 MTCO2P4-201ENST00000517968 247 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AGGF1P4-201ENST00000568249 801 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC091805.2-201ENST00000603848 235 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC005332.10-201ENST00000612725 619 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC091834.1-201ENST00000614543 472 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AP005019.3-201ENST00000620418 560 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC019278.1-201ENST00000623516 479 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 AC110801.1-201ENST00000623590 212 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
DDX56Q9NY93 AL392088.2-201ENST00000637607 285 ntBASIC4.59□□□□□ -1.67
DDX56Q9NY93 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
DDX56Q9NY93 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.59□□□□□ -1.68
DDX56Q9NY93 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
DDX56Q9NY93 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
DDX56Q9NY93 RN7SKP103-201ENST00000363848 320 ntBASIC4.58□□□□□ -1.68
DDX56Q9NY93 SNORA20.2-201ENST00000383922 131 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms