Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 MTND5P27-201ENST00000428871 1720 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC005539.1-201ENST00000443768 1479 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RNA5SP44-201ENST00000410446 133 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RPS3AP25-201ENST00000411660 793 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC069282.1-201ENST00000411911 526 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AL356320.2-201ENST00000417263 507 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AL645937.1-202ENST00000421799 937 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 HMGN2P30-201ENST00000423237 256 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RPF2P1-201ENST00000424137 906 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC006946.1-201ENST00000429106 328 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AL356867.1-201ENST00000429623 299 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 SDCBPP1-201ENST00000440192 890 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 MRPS31P2-201ENST00000451581 518 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RPS4XP22-201ENST00000480755 780 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 DSTNP2-201ENST00000504533 515 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC114322.1-201ENST00000506771 926 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 TXNP6-201ENST00000510190 310 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RNU2-27P-201ENST00000516185 142 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 HIGD1AP17-201ENST00000554576 276 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC090615.1-201ENST00000577519 154 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RPL23AP78-201ENST00000599928 470 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC068620.3-201ENST00000602749 560 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 BNIP3P11-201ENST00000603878 563 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 ELOCP35-201ENST00000604289 336 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RNU6-1192P-201ENST00000612197 107 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 RNU6-489P-201ENST00000618289 107 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC073348.1-201ENST00000623002 331 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 AC005832.2-201ENST00000538921 1430 ntBASIC3.25□□□□□ -1.89
HPF1Q9NWY4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HPF1Q9NWY4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 FRG1CP-201ENST00000358464 769 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 RNU6-198P-201ENST00000384258 104 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 RNU6-1122P-201ENST00000384449 107 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AL391417.1-201ENST00000404100 426 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 U3.39-201ENST00000408569 239 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 DBIP2-201ENST00000419076 262 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 MRPS36P1-201ENST00000421291 307 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 RPL23AP82-202ENST00000427528 469 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 MOB1AP1-201ENST00000430903 535 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 LSM1P1-201ENST00000438629 273 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC091153.1-201ENST00000466297 402 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC112198.1-201ENST00000505369 1220 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC026801.2-201ENST00000515352 425 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 LRRC6P1-201ENST00000532188 885 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC011602.1-201ENST00000546484 331 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 SRGNP1-201ENST00000603392 451 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC093673.2-201ENST00000609674 331 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AL161629.2-201ENST00000615347 275 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HPF1Q9NWY4 AP000526.1-201ENST00000603308 1388 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 MTCO1P9-201ENST00000505577 1534 ntBASIC3.24□□□□□ -1.89
HPF1Q9NWY4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HPF1Q9NWY4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HPF1Q9NWY4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
HPF1Q9NWY4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HPF1Q9NWY4 RNU6-224P-201ENST00000384055 107 ntBASIC3.23□□□□□ -1.89
HPF1Q9NWY4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.23□□□□□ -1.89
HPF1Q9NWY4 DHFRP6-201ENST00000401776 268 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms