Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIR670-201ENST00000390142 98 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 SNORD67-201ENST00000390833 111 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 RNU2-72P-201ENST00000411175 163 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC011242.1-201ENST00000433596 1158 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 USP9YP34-201ENST00000453983 808 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 RPL21P129-201ENST00000491732 478 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 COX7A2P2-201ENST00000505291 250 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 ARL4AP2-201ENST00000507378 601 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC024224.1-201ENST00000538284 609 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 CR383656.7-201ENST00000548164 174 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AL136520.1-202ENST00000555494 763 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 GLUD1P4-201ENST00000590914 418 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 BNIP3P24-201ENST00000593398 557 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 VN1R87P-201ENST00000596706 487 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC096947.1-201ENST00000603233 470 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AL035411.2-201ENST00000604022 421 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 NUTF2P8-201ENST00000604593 363 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 HSPE1P7-201ENST00000604681 321 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AL583856.2-201ENST00000606298 543 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC006249.1-201ENST00000621223 471 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC068880.4-201ENST00000623082 495 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 AC087821.2-201ENST00000637086 450 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
LRRC40Q9H9A6 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AC233263.6-201ENST00000631132 1963 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 Y_RNA.110-201ENST00000363220 99 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 RPS3AP25-201ENST00000411660 793 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 USP9YP19-201ENST00000412165 485 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 RPL27AP8-201ENST00000424277 446 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AL121871.1-201ENST00000443413 436 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AC244505.3-201ENST00000454598 187 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 RN7SL807P-201ENST00000470923 297 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 OR4G11P-201ENST00000492842 939 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AP003102.1-201ENST00000525638 661 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AP001189.2-201ENST00000527320 189 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AC013444.2-201ENST00000603317 787 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 AC097504.2-201ENST00000608088 454 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 OR5BR1P-201ENST00000524992 1330 ntBASIC3.09□□□□□ -1.91
LRRC40Q9H9A6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LRRC40Q9H9A6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 MTND5P19-201ENST00000424872 1794 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC073325.2-201ENST00000339545 159 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 SNORA63.1-201ENST00000362493 131 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 RNVU1-14-201ENST00000384770 164 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC092634.2-201ENST00000428146 1010 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 RPL23AP74-201ENST00000437246 471 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 RPS26P21-201ENST00000475397 348 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 VN1R104P-201ENST00000505115 1009 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC118282.1-201ENST00000506408 765 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC40Q9H9A6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms