Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 AC010620.1-201ENST00000601088 1102 ntBASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 AC004987.4-201ENST00000603383 338 ntBASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 AL731566.2-201ENST00000618971 317 ntBASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 AC006065.5-201ENST00000623427 349 ntBASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 PABPC1P7-201ENST00000413177 1513 ntBASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD1Q9GZZ0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC118273.1-201ENST00000525324 3006 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC004972.1-201ENST00000623934 2209 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RNU6-289P-201ENST00000364093 107 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RNA5SP42-201ENST00000364278 115 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 Y_RNA.302-201ENST00000364997 102 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RNA5SP88-201ENST00000365560 109 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RPL7P60-201ENST00000397636 735 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 HMGB1P17-201ENST00000403495 628 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 MIR1302-8-201ENST00000408342 128 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RN7SKP202-201ENST00000410439 330 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC126124.2-201ENST00000413542 321 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RPL31P45-201ENST00000419532 356 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AL035423.1-201ENST00000420331 213 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 PSMA6P3-201ENST00000428242 164 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC007389.2-201ENST00000434630 306 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RPL23AP74-201ENST00000437246 471 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 MTCYBP39-201ENST00000437562 491 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AL590399.6-201ENST00000446396 307 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RPS27AP8-201ENST00000452665 445 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC114967.1-201ENST00000504890 259 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC112198.1-201ENST00000505369 1220 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 POU5F1P7-201ENST00000508759 541 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 MTND1P22-201ENST00000510572 951 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 TMEM248P1-201ENST00000510579 951 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 PTGES3P3-201ENST00000511479 482 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RN7SKP18-201ENST00000516005 275 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC024224.1-201ENST00000538284 609 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 PCMTD1P7-201ENST00000634506 357 ntBASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXD1Q9GZZ0 NUP58P1-201ENST00000502546 1738 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 DCAF13P1-201ENST00000495256 1330 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 AL672296.1-201ENST00000427780 2158 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU6-989P-201ENST00000362756 107 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNA5SP235-201ENST00000365411 114 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU6-723P-201ENST00000383973 107 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU6-356P-201ENST00000384140 107 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU5A-2P-201ENST00000384337 116 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 AL021407.1-201ENST00000404531 386 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU6-920P-201ENST00000410926 92 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 RNU4-78P-201ENST00000410940 126 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 TPMTP2-201ENST00000414372 726 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 AC012065.2-201ENST00000421295 375 ntBASIC3.3□□□□□ -1.88
HOXD1Q9GZZ0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms