Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 RPL7P30-201ENST00000420888 709 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 OR2B8P-201ENST00000432841 938 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 SEPT7P5-201ENST00000434048 306 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 RPL23AP74-201ENST00000437246 471 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 MUPP-201ENST00000438111 566 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 ARF4P4-201ENST00000439608 520 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 MTND2P7-201ENST00000521337 640 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 FAM60DP-201ENST00000524174 632 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC024224.1-201ENST00000538284 609 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC104072.1-201ENST00000568817 668 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC034268.2-201ENST00000571784 482 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC124016.2-201ENST00000610058 665 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC100793.4-201ENST00000613683 429 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AL512427.1-201ENST00000618593 349 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC007275.1-201ENST00000621243 671 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AL157770.1-201ENST00000623049 439 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 U6.101-201ENST00000637707 76 ntBASIC3.18□□□□□ -1.9
POLR1EQ9GZS1 MTND5P24-201ENST00000438892 1767 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 Y_RNA.25-201ENST00000362528 102 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 RNU6-236P-201ENST00000363886 106 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC019178.2-201ENST00000423595 505 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 GTF2IP23-201ENST00000423746 351 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 MTCO1P3-201ENST00000429327 192 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 RPL23AP69-201ENST00000431134 458 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 EZH2P1-201ENST00000431167 291 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 RAC1P7-201ENST00000445367 377 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC104978.1-201ENST00000449387 391 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC021146.5-201ENST00000503544 545 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 RN7SKP282-201ENST00000516824 299 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 MTCO3P15-201ENST00000526563 574 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 SETP7-201ENST00000552169 453 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC007179.3-201ENST00000604976 235 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 CYCSP41-201ENST00000616920 296 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 AP002371.2-201ENST00000624450 503 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
POLR1EQ9GZS1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 RNU6-882P-201ENST00000391025 103 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 SNRPEP2-201ENST00000397592 279 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 RNU2-47P-201ENST00000410649 186 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC093155.1-201ENST00000440164 826 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 HMGB3P6-201ENST00000444896 598 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 VN1R104P-201ENST00000505115 1009 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 COX7A2P2-201ENST00000505291 250 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC069306.1-201ENST00000507006 843 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC239860.2-201ENST00000525886 270 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 CR383656.7-201ENST00000548164 174 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 AC138915.2-201ENST00000569776 97 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 MIR5708-201ENST00000579723 85 ntBASIC3.16□□□□□ -1.9
POLR1EQ9GZS1 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms