Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AP000867.2-201ENST00000532468 320 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-2Q9C056 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC084824.1-201ENST00000550917 1005 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC104229.1-201ENST00000561364 255 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AP005205.1-201ENST00000563503 508 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC106734.1-201ENST00000568646 663 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 BPTFP1-201ENST00000579209 492 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 MIR5092-201ENST00000583139 88 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AL161756.2-201ENST00000604597 246 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC055876.5-201ENST00000605667 259 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC132825.7-201ENST00000638744 335 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 AC024341.1-201ENST00000526444 1552 ntBASIC2.14□□□□□ -2.07
NKX6-2Q9C056 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 OR5T3-201ENST00000303059 1023 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 RPL21P132-201ENST00000331267 462 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 SNORA63.1-201ENST00000362493 131 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 RNU5D-1-201ENST00000363299 116 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 SNORD56.4-201ENST00000363883 71 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC091862.1-201ENST00000438016 1100 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 PDSS1P2-201ENST00000449397 678 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 NAMPTP2-201ENST00000505629 1115 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC109471.1-201ENST00000511631 612 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC018630.1-201ENST00000541376 925 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC007458.1-201ENST00000542812 373 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 EEF1B2P4-201ENST00000551398 348 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 ISCA1P3-201ENST00000577104 373 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 GLUD1P4-201ENST00000590914 418 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC010620.2-201ENST00000600135 313 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 VN1R85P-201ENST00000601587 426 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC005229.3-201ENST00000603438 323 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 NUP58P1-201ENST00000502546 1738 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.13□□□□□ -2.07
NKX6-2Q9C056 MFSD8-213ENST00000641134 1327 ntBASIC2.13□□□□□ -2.07
NKX6-2Q9C056 AC090740.1-201ENST00000623193 2262 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 SNORA1.3-201ENST00000384676 136 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 RPLP0P7-201ENST00000416050 667 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC018644.1-201ENST00000429934 551 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 MTND4LP10-201ENST00000435146 291 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 PRDX3P3-201ENST00000447765 522 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AL589880.1-201ENST00000448271 287 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 SNRPGP6-201ENST00000451124 220 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 NIPA2P5-201ENST00000452282 464 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 NDUFA5P7-201ENST00000452914 242 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 RPL32P34-201ENST00000486380 400 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 CEACAMP10-202ENST00000495431 496 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 CDC42P4-201ENST00000510507 563 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 SNORA48.9-201ENST00000516419 162 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 SUB1P1-201ENST00000524415 382 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 ZNF705CP-201ENST00000530515 889 ntBASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.12□□□□□ -2.07
NKX6-2Q9C056 GAS5-AS1-201ENST00000602767 694 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms