Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNTNAP3BQ96NU0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 RNA5SP319-201ENST00000362768 119 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-596P-201ENST00000365395 98 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 MIR517A-201ENST00000385001 87 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC007568.1-201ENST00000422912 471 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AL354766.1-201ENST00000423396 542 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 NOP56P2-201ENST00000447491 769 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 SNORA58-201ENST00000505219 137 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AL359273.1-201ENST00000510918 627 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC144568.1-201ENST00000520139 137 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AL359219.2-201ENST00000555184 348 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC009852.2-201ENST00000567898 485 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 NF1P5-201ENST00000588287 448 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC234771.5-201ENST00000600161 514 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 MIR92B-201ENST00000607575 96 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AC023813.4-201ENST00000607580 580 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 BX322639.1-202ENST00000423987 2213 ntBASIC5.66□□□□□ -1.5
CNTNAP3BQ96NU0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNA5SP205-201ENST00000364653 136 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-1303P-201ENST00000364841 107 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 SNORD82-201ENST00000365530 70 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNU5E-6P-201ENST00000365574 115 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 MIR625-201ENST00000385047 85 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 Y_RNA.597-201ENST00000410463 100 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-1135P-201ENST00000411083 103 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 SYF2P2-201ENST00000417620 583 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC093162.1-201ENST00000419682 124 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AL445928.1-201ENST00000435545 222 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC011753.3-201ENST00000443436 406 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNU7-187P-201ENST00000458985 68 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 YWHAEP4-201ENST00000505390 198 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 SEPT14P8-201ENST00000508026 178 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC093815.1-201ENST00000508637 280 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 snoU109.6-201ENST00000516831 118 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-685P-201ENST00000517088 95 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-844P-201ENST00000517175 102 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC126177.3-201ENST00000551839 688 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC087783.2-201ENST00000605070 562 ntBASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 MIR6864-201ENST00000617935 70 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms