Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 DUXAP4-201ENST00000603046 613 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 MIR7151-201ENST00000617477 60 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 OR52H1-202ENST00000641796 1061 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HPS3Q969F9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HPS3Q969F9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.57□□□□□ -1.68
HPS3Q969F9 AC116667.1-201ENST00000604855 2072 ntBASIC4.57□□□□□ -1.68
HPS3Q969F9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.57□□□□□ -1.68
HPS3Q969F9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.56□□□□□ -1.68
HPS3Q969F9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HPS3Q969F9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
HPS3Q969F9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HPS3Q969F9 GNG5P1-201ENST00000255500 204 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 RNU6-1078P-201ENST00000364522 103 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HPS3Q969F9 MIR93-201ENST00000385024 80 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 RNU11-4P-201ENST00000391149 133 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AL603766.1-201ENST00000407763 664 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 RNA5SP239-201ENST00000410218 129 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 RN7SKP27-201ENST00000410684 333 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 RNA5SP104-201ENST00000410989 118 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS3Q969F9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.56□□□□□ -1.68
HPS3Q969F9 AL137014.1-201ENST00000420490 1226 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC233728.2-201ENST00000425348 757 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AL358472.1-201ENST00000431295 329 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 ARPC3P1-201ENST00000437218 533 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 NUTF2P3-201ENST00000448540 384 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS3Q969F9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS3Q969F9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS3Q969F9 UBDP1-202ENST00000457888 382 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 TMED11P-201ENST00000479478 690 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS3Q969F9 MTND2P33-201ENST00000506452 1031 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC017037.2-201ENST00000513850 890 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC103783.1-201ENST00000520506 373 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.56□□□□□ -1.68
HPS3Q969F9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS3Q969F9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.56□□□□□ -1.68
HPS3Q969F9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.56□□□□□ -1.68
HPS3Q969F9 IPO5P1-202ENST00000600039 287 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AL139286.1-201ENST00000604465 483 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC004492.1-201ENST00000607036 742 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC098614.4-201ENST00000607601 462 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 BX664608.1-201ENST00000610519 487 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 TUG1_1.1-201ENST00000610654 145 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC023043.4-201ENST00000612081 449 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC068724.3-201ENST00000625906 87 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 AC027514.1-201ENST00000588561 1603 ntBASIC4.56□□□□□ -1.68
HPS3Q969F9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HPS3Q969F9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.56□□□□□ -1.68
HPS3Q969F9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS3Q969F9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HPS3Q969F9 Z82217.1-201ENST00000625157 8149 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 RHOT1P2-201ENST00000366423 333 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 HMGN1P24-201ENST00000412282 298 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 ELOCP17-201ENST00000414751 326 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 RPL23AP38-201ENST00000423801 469 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 OR2B8P-201ENST00000432841 938 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AL049734.2-201ENST00000441066 616 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AC010469.1-201ENST00000463864 576 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 SRRM1P2-201ENST00000464531 1192 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 RN7SKP21-201ENST00000516503 220 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 RNU7-143P-201ENST00000516781 65 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 RNU6-528P-201ENST00000516926 100 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AP003122.4-201ENST00000530980 758 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HPS3Q969F9 AC123904.2-201ENST00000548059 300 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AL356432.3-201ENST00000568952 465 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AC010546.1-201ENST00000569391 485 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.55□□□□□ -1.68
HPS3Q969F9 UBE2L4-201ENST00000587688 464 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS3Q969F9 AL161637.1-201ENST00000622380 412 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 AL158801.5-201ENST00000623123 465 ntBASIC4.55□□□□□ -1.68
HPS3Q969F9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS3Q969F9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.55□□□□□ -1.68
HPS3Q969F9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
HPS3Q969F9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HPS3Q969F9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HPS3Q969F9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HPS3Q969F9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HPS3Q969F9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS3Q969F9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HPS3Q969F9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.54□□□□□ -1.68
HPS3Q969F9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms