Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RPL7P18-201ENST00000478965 734 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 GMPSP1-201ENST00000514075 579 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 RN7SKP21-201ENST00000516503 220 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 SCARNA14-201ENST00000516903 136 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 OR5G4P-201ENST00000525251 760 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 SETP2-201ENST00000553886 926 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 ZNF415P1-201ENST00000582279 1166 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 HSPE1P7-201ENST00000604681 321 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC244258.1-201ENST00000637553 1071 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 AP000526.1-201ENST00000603308 1388 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 AC106754.1-201ENST00000562632 1513 ntBASIC3.32□□□□□ -1.88
PTP4A1Q93096 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTP4A1Q93096 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
PTP4A1Q93096 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 RNU6-906P-201ENST00000384700 70 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 MTND1P21-201ENST00000412991 285 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 HMGB3P20-201ENST00000417997 600 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC018630.2-202ENST00000422992 927 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 NDUFB4P7-201ENST00000423198 363 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 PPP1R11P2-201ENST00000423543 382 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 OR4K11P-201ENST00000431829 904 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC112653.1-201ENST00000443851 386 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 MRPS31P2-201ENST00000451581 518 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 RNU6-420P-201ENST00000458780 107 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 SETP11-201ENST00000473027 690 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 RN7SL323P-201ENST00000494712 295 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 RNU6-840P-201ENST00000517275 65 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC239860.2-201ENST00000525886 270 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL132857.1-201ENST00000555180 708 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC067959.1-201ENST00000604334 379 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC090186.1-201ENST00000605991 572 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC106052.1-201ENST00000608029 497 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL354798.1-201ENST00000622505 329 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC079597.1-201ENST00000624306 508 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTP4A1Q93096 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTP4A1Q93096 DDX10P1-201ENST00000448545 1933 ntBASIC3.31□□□□□ -1.88
PTP4A1Q93096 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTP4A1Q93096 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 MAPK10-322ENST00000641485 4530 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 MFSD8-236ENST00000641509 4050 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTP4A1Q93096 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC006989.1-201ENST00000427212 131 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC008850.1-201ENST00000427546 362 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 TAAR7P-201ENST00000436141 242 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 MTND1P31-201ENST00000449206 961 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms