Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC009414.1-201ENST00000427200 443 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 RPL7P54-201ENST00000438336 674 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AP003385.6-201ENST00000531603 374 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC034102.8-201ENST00000615146 484 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AL353729.1-201ENST00000425044 720 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC092427.1-202ENST00000430569 476 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AL445646.1-201ENST00000431784 216 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC104308.1-201ENST00000454621 333 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 AC004263.1-201ENST00000479327 332 ntBASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ALMS1Q8TCU4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 SUMO1P4-201ENST00000429430 302 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 RPL23AP20-201ENST00000447965 421 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 MIR4446-201ENST00000578505 67 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AL645944.1-201ENST00000603857 493 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC090425.2-201ENST00000608818 501 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC002064.3-201ENST00000623448 346 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 MTATP6P11-201ENST00000428071 670 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 RPS24P8-201ENST00000431490 402 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 RPS3AP4-201ENST00000555161 764 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC123786.2-201ENST00000603459 275 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 MTCO2P17-201ENST00000424336 677 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 SMARCE1P4-201ENST00000523647 241 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 MIR4781-201ENST00000585250 76 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AL359715.4-201ENST00000606629 1436 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AL096701.2-201ENST00000416920 238 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC016542.2-201ENST00000624201 619 ntBASIC1.48□□□□□ -2.17
ALMS1Q8TCU4 AC010680.1-201ENST00000590024 3590 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 SNORD56.5-201ENST00000364281 72 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 RPL31P1-201ENST00000398116 372 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AL138785.1-201ENST00000425821 331 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC087190.1-201ENST00000484462 480 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AP000787.2-201ENST00000604432 568 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC091953.2-201ENST00000623979 160 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 CU459211.1-201ENST00000635667 749 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC104090.1-201ENST00000506341 1171 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 MIR5007-201ENST00000583098 95 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 Z99129.2-201ENST00000619967 314 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC091046.2-201ENST00000620775 665 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC026412.2-201ENST00000512270 1075 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 SCARNA16.3-201ENST00000516595 184 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 RNA5SP402-201ENST00000517148 110 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 AC008687.2-201ENST00000597865 520 ntBASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
ALMS1Q8TCU4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
ALMS1Q8TCU4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.46□□□□□ -2.17
ALMS1Q8TCU4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RNA5SP189-201ENST00000364920 115 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RPL21P75-201ENST00000396599 483 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RPL21P1-201ENST00000399532 476 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RPL21P28-201ENST00000401418 483 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AL592114.1-201ENST00000403842 483 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 SNORA11.4-201ENST00000408823 129 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms