Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AC090502.2-201ENST00000549267 280 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AC008507.1-201ENST00000587506 734 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AL022067.1-201ENST00000602426 454 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AL365400.2-201ENST00000605604 902 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AC091946.2-201ENST00000606105 291 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AC092954.1-201ENST00000609121 445 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 RMST_8.1-201ENST00000610287 165 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AC012531.5-201ENST00000611375 151 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AC008083.4-201ENST00000615076 444 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 PLCE1P1-201ENST00000622094 305 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AL049777.1-201ENST00000622740 518 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 AL157770.1-201ENST00000623049 439 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 CR381572.1-201ENST00000625098 102 ntBASIC2.5□□□□□ -2.01
LINC01560Q8TB33 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
LINC01560Q8TB33 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RNU1-75P-201ENST00000347264 129 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RNU4-82P-201ENST00000362443 140 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RNA5SP258-201ENST00000362750 119 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 SNORD82-201ENST00000365530 70 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 SUGT1P1-201ENST00000379514 476 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RNU6-1300P-201ENST00000391046 108 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 EIF5P1-201ENST00000400019 1231 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RPS4XP8-201ENST00000402039 771 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 HSPE1P26-201ENST00000405341 275 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 MTND4P3-201ENST00000417829 541 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC063976.3-201ENST00000426849 329 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RPL21P112-201ENST00000434403 463 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC092393.1-201ENST00000439625 742 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AL034418.1-201ENST00000448675 860 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC079776.3-201ENST00000450665 370 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 RPS27AP1-201ENST00000475545 471 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 VPS26AP1-201ENST00000483197 979 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AP001025.2-201ENST00000490908 477 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 BOLA3P3-201ENST00000505182 232 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 HMGB3P15-201ENST00000507326 574 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 FAM60DP-201ENST00000524174 632 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC118942.1-201ENST00000529674 1035 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AL157394.1-201ENST00000562983 1224 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 MIR3908-201ENST00000579798 126 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 MIR3690-201ENST00000580266 75 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC006254.3-201ENST00000603353 884 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC024060.1-201ENST00000607052 494 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC099778.2-201ENST00000610904 211 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC010975.3-201ENST00000618727 978 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AP003485.1-201ENST00000625093 753 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 AC004808.1-201ENST00000627671 721 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 MIR7153-201ENST00000637758 57 ntBASIC2.49□□□□□ -2.01
LINC01560Q8TB33 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
LINC01560Q8TB33 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01560Q8TB33 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01560Q8TB33 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01560Q8TB33 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01560Q8TB33 AC096644.4-201ENST00000563417 2912 ntBASIC2.48□□□□□ -2.01
LINC01560Q8TB33 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LINC01560Q8TB33 Y_RNA.578-201ENST00000390903 88 ntBASIC2.48□□□□□ -2.01
LINC01560Q8TB33 RNU6-837P-201ENST00000391056 108 ntBASIC2.48□□□□□ -2.01
LINC01560Q8TB33 AC016769.3-201ENST00000396562 315 ntBASIC2.48□□□□□ -2.01
LINC01560Q8TB33 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01560Q8TB33 AC019097.1-201ENST00000424783 735 ntBASIC2.48□□□□□ -2.01
LINC01560Q8TB33 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms