Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC104472.2-201ENST00000469035 601 ntBASIC2.73□□□□□ -1.97
RTL9Q8NET4 AC106872.3-201ENST00000495104 446 ntBASIC2.73□□□□□ -1.97
RTL9Q8NET4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.73□□□□□ -1.97
RTL9Q8NET4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.73□□□□□ -1.97
RTL9Q8NET4 OR4R2P-201ENST00000530815 597 ntBASIC2.73□□□□□ -1.97
RTL9Q8NET4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.73□□□□□ -1.97
RTL9Q8NET4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.73□□□□□ -1.97
RTL9Q8NET4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 AL136520.1-201ENST00000600311 1322 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 AC008432.1-201ENST00000615912 1320 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 MTND5P3-201ENST00000438536 1800 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RTL9Q8NET4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 RNU6-233P-201ENST00000410845 141 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 MTATP6P22-201ENST00000507369 598 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.72□□□□□ -1.97
RTL9Q8NET4 AADACP1-206ENST00000561502 1193 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 uc_338.9-201ENST00000617424 182 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 AL160394.1-201ENST00000624765 724 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 MIR219B-201ENST00000637023 88 ntBASIC2.72□□□□□ -1.97
RTL9Q8NET4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.71□□□□□ -1.97
RTL9Q8NET4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 RNU1-51P-201ENST00000365345 176 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 RNA5SP88-201ENST00000365560 109 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 SNORA48.3-201ENST00000391081 134 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 RNU2-71P-201ENST00000411395 189 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 AC004263.1-201ENST00000479327 332 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 RPL21P131-201ENST00000497298 483 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 AC006249.1-201ENST00000621223 471 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
RTL9Q8NET4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.98
RTL9Q8NET4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 METTL21EP-201ENST00000298105 713 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 SNORA7.2-201ENST00000364446 145 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 OR5H15-201ENST00000383696 930 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 EI24P1-201ENST00000416584 867 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AL031736.2-201ENST00000426573 787 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AC009961.3-201ENST00000449832 765 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 HMGB1P15-201ENST00000453854 435 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 CKS1BP2-201ENST00000497342 240 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RTL9Q8NET4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 CCNHP1-201ENST00000513311 678 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.7□□□□□ -1.98
RTL9Q8NET4 DUXAP4-201ENST00000603046 613 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AL390240.1-201ENST00000612950 384 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AC139769.3-201ENST00000618383 175 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AL353997.5-201ENST00000618886 171 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 AC022079.2-201ENST00000619739 566 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 MIR6132-201ENST00000622083 109 ntBASIC2.7□□□□□ -1.98
RTL9Q8NET4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTL9Q8NET4 U8.13-201ENST00000390842 128 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 RNA5SP181-201ENST00000410246 98 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 HMGB1P11-201ENST00000413899 637 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.69□□□□□ -1.98
RTL9Q8NET4 RPL23AP58-201ENST00000440453 469 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.69□□□□□ -1.98
RTL9Q8NET4 TRBV26-201ENST00000456572 344 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 NF1P3-201ENST00000457709 450 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.69□□□□□ -1.98
RTL9Q8NET4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL9Q8NET4 OR6C73P-201ENST00000546432 358 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL9Q8NET4 AP000787.2-201ENST00000604432 568 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RTL9Q8NET4 AP000676.4-201ENST00000624659 623 ntBASIC2.69□□□□□ -1.98
RTL9Q8NET4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTL9Q8NET4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTL9Q8NET4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 ATP5F1P6-201ENST00000402768 767 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 SNORA11.4-201ENST00000408823 129 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 RNU2-2P-201ENST00000410396 191 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 UBBP3-201ENST00000445497 241 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 Z96811.1-201ENST00000445880 108 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 AC146507.1-201ENST00000468335 354 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 RPL23AP55-201ENST00000498163 452 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL9Q8NET4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTL9Q8NET4 AC078814.3-201ENST00000553036 491 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 MTCYBP28-201ENST00000566728 1132 ntBASIC2.68□□□□□ -1.98
RTL9Q8NET4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.68□□□□□ -1.98
RTL9Q8NET4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms