Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RN7SL93P-201ENST00000463035 293 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 RPL31P50-201ENST00000471002 296 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 MTND3P7-201ENST00000474435 343 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 RPL7P24-201ENST00000493052 752 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 MTND1P22-201ENST00000510572 951 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 NARSP2-201ENST00000518524 679 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.23□□□□□ -1.73
USP38Q8NB14 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.23□□□□□ -1.73
USP38Q8NB14 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.23□□□□□ -1.73
USP38Q8NB14 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.23□□□□□ -1.73
USP38Q8NB14 AL390208.1-201ENST00000605885 644 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.23□□□□□ -1.73
USP38Q8NB14 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AC008443.7-201ENST00000622195 246 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AC073530.2-201ENST00000623987 261 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 PCMTD1P7-201ENST00000634506 357 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AL392088.2-201ENST00000637607 285 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 AC099063.3-201ENST00000642066 185 ntBASIC4.23□□□□□ -1.73
USP38Q8NB14 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
USP38Q8NB14 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP38Q8NB14 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.23□□□□□ -1.73
USP38Q8NB14 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.22□□□□□ -1.73
USP38Q8NB14 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.22□□□□□ -1.73
USP38Q8NB14 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC097714.1-201ENST00000511272 1647 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.22□□□□□ -1.73
USP38Q8NB14 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USP38Q8NB14 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USP38Q8NB14 RNU6-433P-201ENST00000363216 104 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC090960.1-201ENST00000421072 306 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 MTCYBP45-201ENST00000435243 565 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 UBE2FP3-201ENST00000436366 524 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 SDCBPP1-201ENST00000440192 890 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.22□□□□□ -1.73
USP38Q8NB14 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 RPS20P32-201ENST00000456044 356 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AP001992.1-205ENST00000462248 379 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 RPL30P6-201ENST00000475925 342 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 TMED11P-201ENST00000479478 690 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 RPL5P23-201ENST00000496040 868 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.22□□□□□ -1.73
USP38Q8NB14 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC005178.1-201ENST00000508392 440 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.22□□□□□ -1.73
USP38Q8NB14 Y_RNA.688-201ENST00000516565 95 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC006960.3-201ENST00000561845 705 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AC135628.1-201ENST00000568867 534 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 MIR3915-201ENST00000578518 97 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 Z94722.1-201ENST00000604328 474 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AC107214.2-201ENST00000608204 634 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 MIR8057-201ENST00000620957 69 ntBASIC4.22□□□□□ -1.73
USP38Q8NB14 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP38Q8NB14 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.22□□□□□ -1.73
USP38Q8NB14 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.21□□□□□ -1.73
USP38Q8NB14 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP38Q8NB14 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USP38Q8NB14 RNU1-18P-201ENST00000363062 164 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 RNU6-837P-201ENST00000391056 108 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AC127526.1-201ENST00000417526 366 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.21□□□□□ -1.74
USP38Q8NB14 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AC007742.1-201ENST00000425789 329 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 ELOCP26-201ENST00000436067 329 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.21□□□□□ -1.74
USP38Q8NB14 RANP8-201ENST00000444720 713 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP38Q8NB14 ZNF114P1-201ENST00000453500 292 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 HMGN2P7-201ENST00000456186 273 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AP000873.1-201ENST00000463987 400 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 RPL9P32-201ENST00000464118 620 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AC008155.2-201ENST00000464337 397 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms