Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC006971.1-201ENST00000407916 4486 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AP004289.2-201ENST00000444413 1457 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 HSPE1P11-201ENST00000339579 310 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-38P-201ENST00000384085 107 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-903P-201ENST00000391270 109 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 U3.30-201ENST00000391308 210 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 CYB5AP4-201ENST00000396692 399 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-193P-201ENST00000410977 107 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 SAR1AP4-201ENST00000429225 591 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RPS17P8-201ENST00000434525 335 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RPL7AP61-201ENST00000443410 636 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 BX276092.4-201ENST00000452056 248 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-333P-201ENST00000459117 107 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL517P-201ENST00000462240 305 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AL591473.1-201ENST00000464297 313 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC010683.1-201ENST00000473673 378 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC116562.3-201ENST00000506136 177 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 HMGB3P16-201ENST00000508037 287 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AP005639.2-201ENST00000527592 928 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC068587.5-201ENST00000528506 175 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 MIR4775-201ENST00000581168 75 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL52P-201ENST00000584271 284 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC022726.1-201ENST00000587475 207 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC113139.1-201ENST00000605049 239 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AC004908.2-201ENST00000609090 574 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL722P-201ENST00000617780 284 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL565P-201ENST00000618246 284 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 AL022401.1-201ENST00000619498 108 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 BX005214.3-202ENST00000619809 325 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM48Q8IWZ4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 MAPK10-320ENST00000641462 6696 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-552P-201ENST00000362869 119 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-511P-201ENST00000363496 107 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 Y_RNA.384-201ENST00000383909 102 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 Y_RNA.431-201ENST00000384086 102 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 MIR514A2-201ENST00000385131 88 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 MIR514A3-201ENST00000385132 88 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RPS16P5-201ENST00000406501 404 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RN7SKP16-201ENST00000410180 299 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU4-26P-201ENST00000410270 107 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU2-39P-201ENST00000410604 198 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNA5SP345-201ENST00000410646 108 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU2-47P-201ENST00000410649 186 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 BX323014.1-201ENST00000412876 237 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RPL36AP10-201ENST00000421785 322 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL353729.1-201ENST00000425044 720 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 OR2AS1P-201ENST00000427827 319 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 MED13P1-201ENST00000428342 171 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL451139.1-201ENST00000434718 346 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC016831.4-201ENST00000438302 307 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU7-59P-201ENST00000459101 61 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RN7SL809P-201ENST00000482040 297 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC073073.1-201ENST00000493920 463 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 Y_RNA.665-201ENST00000516177 98 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU1-6P-201ENST00000516290 144 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU6-1038P-201ENST00000516516 104 ntBASIC4.69□□□□□ -1.66
TRIM48Q8IWZ4 RNU7-51P-201ENST00000516560 62 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms