Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC245036.5-201ENST00000596330 847 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AF131215.7-201ENST00000602443 707 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC005046.1-201ENST00000608515 625 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC008083.4-201ENST00000615076 444 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC095031.1-201ENST00000623685 672 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 LRRC77P-213ENST00000637727 880 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 AC025263.3-201ENST00000622965 1396 ntBASIC2.87□□□□□ -1.95
CDKL3Q8IVW4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 RNU6-441P-201ENST00000384545 106 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 SNORD65C-201ENST00000390962 71 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 RNU6-77P-201ENST00000410554 91 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 RNU4-78P-201ENST00000410940 126 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 MTCO2P1-201ENST00000424648 477 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 RPL35AP12-201ENST00000425362 338 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC006548.1-201ENST00000427470 102 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 MOB1AP2-201ENST00000446060 614 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC004022.1-201ENST00000447766 1066 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 RPL23AP20-201ENST00000447965 421 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 GTF2IP12-201ENST00000456547 356 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC009901.1-201ENST00000506703 541 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC010374.2-201ENST00000512933 535 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 GMPSP1-201ENST00000514075 579 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 IGJP1-201ENST00000522682 475 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC093510.2-201ENST00000562820 896 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 MIR4325-201ENST00000583049 90 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AL133507.1-201ENST00000605269 557 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AL627309.6-201ENST00000606857 840 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC068722.2-201ENST00000618734 544 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 CR381572.1-201ENST00000625098 102 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 MTND5P31-201ENST00000419366 1374 ntBASIC2.86□□□□□ -1.95
CDKL3Q8IVW4 AC080100.1-201ENST00000624239 5356 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 RNU1-109P-201ENST00000383960 147 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC246680.2-201ENST00000422106 389 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC127537.2-201ENST00000439258 465 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 GXYLT1P1-201ENST00000446657 490 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 RSL24D1P3-201ENST00000449255 495 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC008379.1-201ENST00000463655 464 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 RPS29P26-201ENST00000477483 171 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 MTCO3P44-201ENST00000510977 541 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 RNU6-334P-201ENST00000517072 102 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC113192.3-201ENST00000529152 742 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AL133271.1-201ENST00000538229 291 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC004217.3-201ENST00000551552 878 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AL391156.1-201ENST00000554965 554 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC124283.4-201ENST00000581815 456 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC019159.1-201ENST00000605094 187 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC008277.2-201ENST00000605196 797 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 HSPE1P14-201ENST00000605812 302 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC073348.1-201ENST00000623002 331 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC002064.3-201ENST00000623448 346 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 AC106730.3-201ENST00000624568 641 ntBASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDKL3Q8IVW4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AC096664.2-201ENST00000411843 406 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 HMGN2P30-201ENST00000423237 256 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AL158053.1-201ENST00000441503 453 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 RNA5SP310-201ENST00000459084 116 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 RN7SL499P-201ENST00000481141 276 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
CDKL3Q8IVW4 AP001025.2-201ENST00000490908 477 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms