Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HMGB1P31-201ENST00000437242 427 ntBASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 TVP23BP2-201ENST00000455082 615 ntBASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 AL163540.1-201ENST00000485382 386 ntBASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 RPP40P2-201ENST00000603596 712 ntBASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 AC012531.5-201ENST00000611375 151 ntBASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13BQ7Z7G8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.21
VPS13BQ7Z7G8 AC244517.1-201ENST00000606030 2086 ntBASIC1.21□□□□□ -2.21
VPS13BQ7Z7G8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC004965.1-201ENST00000413033 213 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 USP9YP6-201ENST00000413550 854 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 USP9YP34-201ENST00000453983 808 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 TRAV31-201ENST00000502780 342 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 CBX3P4-201ENST00000538909 354 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 MIR8081-201ENST00000611533 95 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC106730.3-201ENST00000624568 641 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 ZNF542P-204ENST00000482727 1305 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AL139811.1-201ENST00000424779 2299 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 NDUFB4P6-201ENST00000436819 366 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 CBWD4P-201ENST00000445695 655 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC103988.1-201ENST00000566382 2177 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 MIR6073-201ENST00000352083 89 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AL021407.1-201ENST00000404531 386 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 VN1R31P-201ENST00000417498 730 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC009237.2-201ENST00000421358 284 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AL445685.2-201ENST00000422551 342 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 SAR1AP4-201ENST00000429225 591 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AL451074.3-201ENST00000437709 472 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 AC011352.3-201ENST00000505162 593 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 MIR3683-201ENST00000580847 82 ntBASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS13BQ7Z7G8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 U3.37-201ENST00000408528 213 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 EI24P1-201ENST00000416584 867 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC107398.1-201ENST00000486904 505 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC009314.1-201ENST00000603871 304 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 LINC00216-201ENST00000623548 1126 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AP000648.3-201ENST00000623539 4507 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 SNORD114-26-201ENST00000363543 72 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 SNORA62.2-201ENST00000364672 152 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 NDUFB4P5-201ENST00000415445 361 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC106901.1-201ENST00000425086 698 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC010546.1-201ENST00000569391 485 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 HMGB1P11-201ENST00000413899 637 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 NDUFS5P3-201ENST00000450668 321 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 RNU6-84P-201ENST00000607737 102 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 AC007620.3-201ENST00000608131 497 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 MIR6132-201ENST00000622083 109 ntBASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS13BQ7Z7G8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 RPS27P5-201ENST00000444247 244 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 OR52A4P-203ENST00000498233 1014 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 HMGB3P15-201ENST00000507326 574 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 AC023043.3-201ENST00000593113 385 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 MIR6895-201ENST00000613497 78 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 HPVC1-201ENST00000629899 1198 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 AC009452.1-201ENST00000640823 606 ntBASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS13BQ7Z7G8 RPL7P37-201ENST00000425095 738 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms