Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RN7SKP159-201ENST00000410657 292 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 RNA5SP111-201ENST00000411386 101 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 RBMY1KP-201ENST00000423480 476 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AL049745.1-201ENST00000433953 286 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 FTH1P25-201ENST00000447665 469 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 MTND4LP30-201ENST00000454092 297 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 PCMTD1P1-201ENST00000455560 355 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 CEACAMP10-202ENST00000495431 496 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 Y_RNA.673-201ENST00000516306 88 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 CYCSP27-201ENST00000527643 293 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AL670379.6-201ENST00000603753 252 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AL670379.1-201ENST00000604752 252 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AL670379.5-201ENST00000605253 252 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AL670379.8-201ENST00000605353 252 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 AL670379.7-201ENST00000605823 252 ntBASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SH3RF1Q7Z6J0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.21□□□□□ -1.41
SH3RF1Q7Z6J0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SH3RF1Q7Z6J0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SH3RF1Q7Z6J0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SH3RF1Q7Z6J0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SH3RF1Q7Z6J0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SH3RF1Q7Z6J0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 RNU1-43P-201ENST00000365052 165 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 SNORA70.6-201ENST00000383934 134 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-1293P-201ENST00000384077 107 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 Y_RNA.562-201ENST00000384695 113 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 PPIAP9-201ENST00000403866 498 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 SNORA11-201ENST00000408789 128 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC069213.2-201ENST00000420238 366 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AL590135.1-201ENST00000422215 156 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC108075.1-201ENST00000424692 529 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AL031736.2-201ENST00000426573 787 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 RHOT1P3-201ENST00000436571 331 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 FABP5P13-201ENST00000452144 328 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 MTCO3P8-201ENST00000453691 755 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC117503.1-201ENST00000472241 394 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC006463.2-201ENST00000473326 348 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 SNRPCP2-201ENST00000504370 475 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AL671862.1-201ENST00000515851 349 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 SNORA40.15-201ENST00000516884 107 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 MIR4293-201ENST00000584305 78 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 MIR7853-201ENST00000584820 132 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-156P-201ENST00000621869 107 ntBASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SH3RF1Q7Z6J0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 AC092681.1-201ENST00000297369 291 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 RNU6-662P-201ENST00000384253 104 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 CYB5AP4-201ENST00000396692 399 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 AL445189.1-201ENST00000405722 338 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 RN7SKP126-201ENST00000411143 300 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 AC011933.1-201ENST00000413334 321 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 AC093162.1-201ENST00000419682 124 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 RPL12P34-201ENST00000424532 479 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 OR6D1P-201ENST00000436165 939 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 AC011816.1-201ENST00000441346 546 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 RPS11P7-201ENST00000442125 465 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 RPS17P13-201ENST00000448974 407 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 PPIAP3-201ENST00000450588 505 ntBASIC6.2□□□□□ -1.42
SH3RF1Q7Z6J0 AL389915.2-201ENST00000454576 441 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms