Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
NPHP3Q7Z494 MTCO3P15-201ENST00000526563 574 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 LRRC6P1-201ENST00000532188 885 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 CBX3P5-201ENST00000552017 521 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.91□□□□□ -1.78
NPHP3Q7Z494 AC006270.2-201ENST00000578523 652 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 MIR4524B-201ENST00000581569 115 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 OR4G1P-201ENST00000588632 938 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 AP001542.2-201ENST00000593141 364 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 VN1R79P-201ENST00000593540 513 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 VN1R78P-201ENST00000597393 564 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.91□□□□□ -1.78
NPHP3Q7Z494 AL391001.1-201ENST00000602747 715 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.91□□□□□ -1.78
NPHP3Q7Z494 MIR6817-201ENST00000615588 66 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 U73479.1-201ENST00000618062 168 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NPHP3Q7Z494 AL078595.3-201ENST00000623815 1166 ntBASIC3.91□□□□□ -1.78
NPHP3Q7Z494 PABPC1P7-201ENST00000413177 1513 ntBASIC3.9□□□□□ -1.78
NPHP3Q7Z494 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPHP3Q7Z494 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 RNU6-224P-201ENST00000384055 107 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AL138827.1-201ENST00000402666 306 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 RNA5SP21-201ENST00000410917 96 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AC245291.1-201ENST00000419501 328 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 RPP40P1-201ENST00000426762 456 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 OR10R1P-201ENST00000441524 1141 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AL358794.1-201ENST00000445689 381 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 snoU13.26-201ENST00000459452 105 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AP001025.2-201ENST00000490908 477 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 RNF138P1-201ENST00000502765 546 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AP001372.4-201ENST00000524889 472 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 OR10V3P-201ENST00000525712 725 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AC044913.1-201ENST00000557200 430 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AL445435.1-201ENST00000604232 665 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AC009237.15-201ENST00000610252 501 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AL450472.3-201ENST00000615578 367 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AC123767.1-202ENST00000620407 817 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 AC023510.2-201ENST00000622162 746 ntBASIC3.9□□□□□ -1.79
NPHP3Q7Z494 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPHP3Q7Z494 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AP000568.1-201ENST00000282964 442 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 RNA5SP383-201ENST00000362934 120 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 RNA5SP68-201ENST00000363885 119 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 RNU6-1226P-201ENST00000384317 107 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 RPS3AP9-201ENST00000417027 792 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 DUTP6-201ENST00000425573 462 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC125238.1-201ENST00000448842 249 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC108078.3-201ENST00000502633 489 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC011352.3-201ENST00000505162 593 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 SNORA64.4-201ENST00000516632 81 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 MTND1P8-201ENST00000571424 950 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 RNU4-5P-201ENST00000607255 135 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AP005137.2-201ENST00000609238 400 ntBASIC3.89□□□□□ -1.79
NPHP3Q7Z494 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.89□□□□□ -1.79
NPHP3Q7Z494 SGO1P1-201ENST00000603525 1447 ntBASIC3.88□□□□□ -1.79
NPHP3Q7Z494 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.88□□□□□ -1.79
NPHP3Q7Z494 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.88□□□□□ -1.79
NPHP3Q7Z494 SEPT7P7-201ENST00000420492 1301 ntBASIC3.88□□□□□ -1.79
NPHP3Q7Z494 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPHP3Q7Z494 RNU1-112P-201ENST00000364401 164 ntBASIC3.88□□□□□ -1.79
NPHP3Q7Z494 MIR16-1-201ENST00000385271 89 ntBASIC3.88□□□□□ -1.79
NPHP3Q7Z494 MTCO1P56-201ENST00000401674 224 ntBASIC3.88□□□□□ -1.79
NPHP3Q7Z494 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHP3Q7Z494 MTCYBP24-201ENST00000420387 1106 ntBASIC3.88□□□□□ -1.79
NPHP3Q7Z494 AL031313.1-201ENST00000448435 256 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms