Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL139413.1-201ENST00000421309 217 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 SDCBPP2-201ENST00000424643 885 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC023347.2-201ENST00000433994 462 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RPS26P40-201ENST00000435209 294 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 MTCYBP45-201ENST00000435243 565 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RPL12P46-201ENST00000436610 195 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RSU1P2-202ENST00000437884 485 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC073614.1-201ENST00000438690 650 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 MTND6P18-201ENST00000439477 513 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RPS29P25-201ENST00000481709 171 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RPS3AP14-201ENST00000483907 780 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 ARL2BPP5-201ENST00000523141 481 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AP001893.2-201ENST00000526949 202 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 CENPUP2-201ENST00000555897 1186 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AP001180.3-201ENST00000582221 145 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC005730.3-201ENST00000583067 366 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC115085.1-201ENST00000588924 229 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL117336.2-201ENST00000602435 335 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL590392.1-201ENST00000604960 446 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL365503.1-201ENST00000605247 905 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC104260.1-201ENST00000616660 539 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL354685.2-201ENST00000448218 1447 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.61-201ENST00000362835 102 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 U8.3-201ENST00000363321 132 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RNA5SP322-201ENST00000363617 119 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RNU6-534P-201ENST00000364877 106 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SNORA70C-201ENST00000384538 135 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 MT-TL1-201ENST00000386347 75 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RPS26P8-201ENST00000393490 348 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SNRPEP2-201ENST00000397592 279 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RPL21P65-201ENST00000406094 466 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC009237.5-201ENST00000414271 501 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AL358934.1-201ENST00000432346 324 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC079448.1-201ENST00000449377 373 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 BX322784.1-201ENST00000455793 1077 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RNU7-136P-201ENST00000458819 69 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC087312.1-201ENST00000471411 480 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC091951.2-201ENST00000500762 203 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 HMGB1P29-201ENST00000505659 499 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC026412.2-201ENST00000512270 1075 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RAB11AP2-201ENST00000545905 639 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RPL21P5-201ENST00000554662 472 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC090877.1-201ENST00000561418 344 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 HMGB1P33-201ENST00000563485 527 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC136624.4-201ENST00000573044 370 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SNORD39.3-201ENST00000584451 71 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC017100.2-201ENST00000584628 355 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC020914.4-201ENST00000597690 277 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC112230.1-201ENST00000604342 547 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 HMGB1P50-201ENST00000605814 607 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC008536.2-201ENST00000607284 349 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC112484.5-201ENST00000624189 228 ntBASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms