Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.84□□□□□ -2.12
RIF1Q5UIP0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.12
RIF1Q5UIP0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RIF1Q5UIP0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 OR4P1P-201ENST00000530808 1136 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 AL137100.2-201ENST00000555786 315 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 AC073387.2-201ENST00000604797 784 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 AL160394.1-201ENST00000624765 724 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 AC005005.2-201ENST00000420779 380 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 AL513321.1-201ENST00000441175 761 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.83□□□□□ -2.12
RIF1Q5UIP0 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
RIF1Q5UIP0 SEPT7P7-201ENST00000420492 1301 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 U8.8-201ENST00000365399 135 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 TTC39CP1-201ENST00000512513 755 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 AC098848.2-201ENST00000588023 330 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 MIR181B1-201ENST00000385240 110 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 RPL36AP33-201ENST00000450395 310 ntBASIC1.82□□□□□ -2.12
RIF1Q5UIP0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
RIF1Q5UIP0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 HMGN1P33-201ENST00000432945 451 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC009969.1-201ENST00000438726 172 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 RPL23AP20-201ENST00000447965 421 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 HMGB3P8-201ENST00000449709 577 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AP002748.2-201ENST00000528671 348 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AL161670.1-201ENST00000554348 137 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC092326.2-201ENST00000624772 1561 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 MIR96-201ENST00000362288 78 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 OR5H15-201ENST00000383696 930 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 MIR3074-201ENST00000384885 81 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AL627390.1-201ENST00000396055 340 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC073136.2-201ENST00000417282 849 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 PIGFP3-201ENST00000441918 722 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AP001207.1-201ENST00000524051 481 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 AC099654.11-201ENST00000638857 294 ntBASIC1.81□□□□□ -2.12
RIF1Q5UIP0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RIF1Q5UIP0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 AC245517.2-201ENST00000442890 346 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 AC107393.1-201ENST00000512403 346 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 AC119751.1-201ENST00000513357 765 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 AC025048.6-202ENST00000627667 438 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 Y_RNA.30-201ENST00000362572 97 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 Z99714.1-201ENST00000450463 807 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 RN7SL297P-201ENST00000483161 293 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 AC241377.1-201ENST00000619797 406 ntBASIC1.8□□□□□ -2.12
RIF1Q5UIP0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RIF1Q5UIP0 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AC006378.2-201ENST00000623178 2476 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RIF1Q5UIP0 RNA5SP37-201ENST00000365420 130 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 TPMTP3-201ENST00000411928 735 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 RPS15AP6-201ENST00000420703 385 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AL589765.3-201ENST00000446084 462 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AC068305.1-201ENST00000497406 726 ntBASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.79□□□□□ -2.12
RIF1Q5UIP0 AC067805.1-201ENST00000559344 470 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms