Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNA5SP333-201ENST00000363466 118 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 Y_RNA.172-201ENST00000363765 102 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 RNA5SP334-201ENST00000364825 118 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 SNORA43.1-201ENST00000364863 140 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 MIR937-201ENST00000401271 86 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 AL160275.2-201ENST00000412010 394 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 AL161636.2-201ENST00000445179 927 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 MRPS10P1-201ENST00000448483 130 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 RNU7-197P-201ENST00000458836 62 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 AC073901.1-201ENST00000462471 408 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 AC005726.1-201ENST00000494679 427 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 RN7SL284P-201ENST00000498823 275 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 MTND3P25-201ENST00000509243 135 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 Y_RNA.677-201ENST00000516401 85 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 MIR5692A1-201ENST00000580523 69 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VARS2Q5ST30 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 AC022325.1-201ENST00000502748 2199 ntBASIC6.59□□□□□ -1.35
VARS2Q5ST30 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VARS2Q5ST30 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
VARS2Q5ST30 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
VARS2Q5ST30 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
VARS2Q5ST30 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
VARS2Q5ST30 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
VARS2Q5ST30 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.59□□□□□ -1.36
VARS2Q5ST30 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 RNU6-211P-201ENST00000384047 107 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 RNA5SP284-201ENST00000384547 118 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 RNU6-754P-201ENST00000391166 107 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 RPL35AP31-201ENST00000418340 337 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 AC009237.7-201ENST00000447357 229 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 RBMY2TP-201ENST00000451162 947 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 RN7SL273P-201ENST00000481561 299 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 RPL23AP40-201ENST00000487630 390 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 MIR4431-201ENST00000579990 94 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 AC027229.1-201ENST00000583887 253 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 BPIFA4P-203ENST00000603168 689 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 AC245014.3-201ENST00000618589 347 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 AC110801.1-201ENST00000623590 212 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 AL121768.1-201ENST00000613917 2544 ntBASIC6.58□□□□□ -1.36
VARS2Q5ST30 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
VARS2Q5ST30 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VARS2Q5ST30 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VARS2Q5ST30 RBMY1HP-201ENST00000382759 1389 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AL078621.3-201ENST00000623707 2042 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 SNX18P3-202ENST00000565670 1750 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 AL731556.1-201ENST00000394628 3711 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 BIN2P1-201ENST00000504996 1530 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AL365440.1-201ENST00000436135 2167 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 RNA5SP477-201ENST00000362639 119 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 RNU6-199P-201ENST00000362954 107 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 RNU6-926P-201ENST00000384075 107 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 RNU6-376P-201ENST00000384731 106 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 MIR433-201ENST00000384837 93 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC245096.1-201ENST00000413104 546 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 RPS26P56-201ENST00000444468 240 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC034236.1-201ENST00000469891 373 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC104057.1-201ENST00000515547 497 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 RNA5SP271-201ENST00000516700 88 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 RNU6-537P-201ENST00000517277 103 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 IGHV1-14-201ENST00000523391 241 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.57□□□□□ -1.36
VARS2Q5ST30 AC115085.1-201ENST00000588924 229 ntBASIC6.57□□□□□ -1.36
VARS2Q5ST30 AL352984.2-201ENST00000611153 546 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms