Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC93Q567U6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC93Q567U6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 RNA5SP167-201ENST00000365461 116 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 RN7SKP56-201ENST00000410513 331 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC096632.1-201ENST00000427395 310 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 SNRPEP7-201ENST00000438350 220 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 MTCO2P3-201ENST00000442543 421 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 SNORA59A-201ENST00000459326 152 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC021678.1-201ENST00000505195 936 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 RN7SKP18-201ENST00000516005 275 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC025881.1-201ENST00000518851 512 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC087369.1-201ENST00000520775 996 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 ZNF705CP-201ENST00000530515 889 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC068587.4-201ENST00000533893 186 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 LSM6P2-201ENST00000552208 177 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AGGF1P8-201ENST00000562979 1000 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC112187.2-201ENST00000604345 283 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AL009028.1-201ENST00000604895 802 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC012603.1-201ENST00000606424 528 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC103710.4-201ENST00000609301 899 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AL357080.1-201ENST00000617394 239 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC138932.5-201ENST00000617759 563 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC092447.7-201ENST00000422212 1621 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 AC027290.2-201ENST00000623210 18662 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 PABPC1P7-201ENST00000413177 1513 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC93Q567U6 TEX21P-201ENST00000447107 1476 ntBASIC4.81□□□□□ -1.64
CCDC93Q567U6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC93Q567U6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC93Q567U6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 Y_RNA.97-201ENST00000363094 102 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 RNU6-1042P-201ENST00000384204 107 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 MIR218-2-201ENST00000385006 110 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AL023807.1-201ENST00000407932 359 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 RNU2-66P-201ENST00000410650 161 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 RPS3AP9-201ENST00000417027 792 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 GMPSP1-201ENST00000514075 579 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 FABP5P5-201ENST00000515537 406 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC090281.1-201ENST00000523019 276 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AP003392.2-201ENST00000527269 208 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 HSPE1P3-201ENST00000559254 309 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 MIR5186-201ENST00000577504 120 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 MTATP6P3-201ENST00000581686 676 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 MIR5187-201ENST00000583479 76 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC005771.1-201ENST00000585581 349 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC090186.1-201ENST00000605991 572 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC008498.1-201ENST00000613012 531 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC027807.2-201ENST00000616099 408 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 U73479.1-201ENST00000618062 168 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AL139089.1-201ENST00000620372 975 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC93Q567U6 AP002907.1-201ENST00000606361 1430 ntBASIC4.8□□□□□ -1.64
CCDC93Q567U6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC93Q567U6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC93Q567U6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC93Q567U6 Y_RNA.6-201ENST00000362350 114 ntBASIC4.79□□□□□ -1.64
CCDC93Q567U6 RNU6-348P-201ENST00000384386 107 ntBASIC4.79□□□□□ -1.64
CCDC93Q567U6 ZNF603P-201ENST00000405613 487 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms