Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 SNRPFP4-201ENST00000456366 242 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 snoU13.8-201ENST00000458890 104 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 LARP1BP2-201ENST00000486594 519 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC034222.1-201ENST00000494052 532 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC112204.1-201ENST00000502591 103 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 RNA5SP519-201ENST00000516480 119 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AP003122.4-201ENST00000530980 758 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC034268.2-201ENST00000571784 482 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC137800.2-201ENST00000574375 120 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AL451044.1-201ENST00000604867 238 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AL353621.2-201ENST00000605340 133 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC105429.2-201ENST00000610567 517 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 U4.5-201ENST00000617137 123 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC092125.1-201ENST00000562568 1995 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 ELF2P3-201ENST00000445099 1506 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 AC092447.10-201ENST00000620607 1652 ntBASIC4.45□□□□□ -1.7
SLC44A4Q53GD3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL592437.2-201ENST00000421655 2434 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RNU1-14P-201ENST00000362759 152 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 MIR200C-201ENST00000384980 68 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 MIR513A2-201ENST00000385249 127 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RNA5SP36-201ENST00000410197 133 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RN7SKP235-201ENST00000410662 305 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL157831.1-201ENST00000426134 473 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 ISCA1P1-201ENST00000426679 387 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RPL22P17-201ENST00000438729 315 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RPS29P7-201ENST00000439662 171 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 PGBD4P3-201ENST00000440731 581 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RPL23AP33-201ENST00000442301 452 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 WASF1P1-201ENST00000447560 1131 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL359385.1-201ENST00000456509 365 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL121769.1-201ENST00000469473 401 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 VN1R105P-201ENST00000486595 910 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 PRDX4P1-201ENST00000507189 574 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 TMEM248P1-201ENST00000510579 951 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC099522.1-202ENST00000514718 367 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 DEFB108A-201ENST00000530110 222 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 RPL21P5-201ENST00000554662 472 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL157394.1-201ENST00000562983 1224 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC090615.1-201ENST00000577519 154 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AL669831.4-202ENST00000590817 238 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC004853.1-201ENST00000604902 698 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC010680.4-201ENST00000605334 543 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 FAM27D1-201ENST00000612308 341 ntBASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC44A4Q53GD3 AC007546.1-201ENST00000619452 559 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms