Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC004022.1-201ENST00000447766 1066 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX4Q33E94 SNORA84-201ENST00000459229 133 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC008155.2-201ENST00000464337 397 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AP002812.1-201ENST00000495378 474 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AC027309.2-201ENST00000520566 192 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AP003385.6-201ENST00000531603 374 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 MTCYBP27-201ENST00000555160 670 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 NCAPGP2-201ENST00000557911 754 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.8□□□□□ -1.96
RFX4Q33E94 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.8□□□□□ -1.96
RFX4Q33E94 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFX4Q33E94 AC138915.2-201ENST00000569776 97 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AC103881.1-201ENST00000603476 538 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AL391834.2-201ENST00000609982 546 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC100793.4-201ENST00000613683 429 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC022306.3-201ENST00000619930 550 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX4Q33E94 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX4Q33E94 ZNF663P-202ENST00000641770 1131 ntBASIC2.8□□□□□ -1.96
RFX4Q33E94 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.8□□□□□ -1.96
RFX4Q33E94 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX4Q33E94 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFX4Q33E94 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFX4Q33E94 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFX4Q33E94 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
RFX4Q33E94 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX4Q33E94 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RFX4Q33E94 RNVU1-3-201ENST00000364313 161 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 SNORD82-201ENST00000365530 70 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 Y_RNA.472-201ENST00000384322 102 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 SNORD15B-201ENST00000384714 146 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 MIR449B-201ENST00000384995 97 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 SNORA40.2-201ENST00000390847 128 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AL161449.1-201ENST00000414531 1199 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 OR4K6P-201ENST00000416478 897 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 DPRXP1-201ENST00000426312 460 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC006548.1-201ENST00000427470 102 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AC104332.2-201ENST00000429959 156 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 HSFY7P-201ENST00000432672 318 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AL159987.2-201ENST00000432754 307 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX4Q33E94 HSFY8P-201ENST00000437934 318 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 MTCO1P53-201ENST00000441633 699 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 MTCO1P48-201ENST00000448024 1096 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RFX4Q33E94 HSFY5P-201ENST00000453726 309 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 RPS27AP9-201ENST00000477681 438 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC013828.1-201ENST00000481845 158 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AC104986.1-201ENST00000517978 436 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AP000857.1-201ENST00000532151 543 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX4Q33E94 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.79□□□□□ -1.96
RFX4Q33E94 MTND3P13-201ENST00000574391 343 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX4Q33E94 VN1R83P-201ENST00000595685 445 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC091057.3-201ENST00000602684 733 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC245389.1-201ENST00000605141 529 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC097504.2-201ENST00000608088 454 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AL020991.1-201ENST00000612314 373 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC138932.5-201ENST00000617759 563 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX4Q33E94 AL121895.2-201ENST00000619558 447 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 CR381572.1-201ENST00000625098 102 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX4Q33E94 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 AC090897.3-201ENST00000636973 1157 ntBASIC2.79□□□□□ -1.96
RFX4Q33E94 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.79□□□□□ -1.96
RFX4Q33E94 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RFX4Q33E94 MTCO1P12-201ENST00000414273 1543 ntBASIC2.78□□□□□ -1.96
RFX4Q33E94 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX4Q33E94 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFX4Q33E94 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFX4Q33E94 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RFX4Q33E94 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX4Q33E94 RPL9P7-201ENST00000330965 580 ntBASIC2.78□□□□□ -1.96
RFX4Q33E94 RNA5SP258-201ENST00000362750 119 ntBASIC2.78□□□□□ -1.96
RFX4Q33E94 U3.29-201ENST00000391296 212 ntBASIC2.78□□□□□ -1.96
RFX4Q33E94 TAF9BP1-201ENST00000396646 746 ntBASIC2.78□□□□□ -1.96
RFX4Q33E94 ATP5F1P3-201ENST00000397213 657 ntBASIC2.78□□□□□ -1.96
RFX4Q33E94 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RFX4Q33E94 AL024474.1-201ENST00000404655 591 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms