Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAT1P1-201ENST00000406588 507 ntBASIC2.04□□□□□ -2.08
UBA52P62987 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.04□□□□□ -2.08
UBA52P62987 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.04□□□□□ -2.08
UBA52P62987 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.04□□□□□ -2.08
UBA52P62987 AL513477.1-202ENST00000417061 214 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.04□□□□□ -2.08
UBA52P62987 ATP5F1P1-201ENST00000433775 569 ntBASIC2.04□□□□□ -2.08
UBA52P62987 SNRPEP4-201ENST00000435815 279 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AC093716.1-201ENST00000435923 377 ntBASIC2.04□□□□□ -2.08
UBA52P62987 HMGB3P12-201ENST00000438745 556 ntBASIC2.04□□□□□ -2.08
UBA52P62987 WASF1P1-201ENST00000447560 1131 ntBASIC2.04□□□□□ -2.08
UBA52P62987 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
UBA52P62987 GTF2IP9-201ENST00000502460 301 ntBASIC2.04□□□□□ -2.08
UBA52P62987 OR5H5P-201ENST00000503164 928 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.04□□□□□ -2.08
UBA52P62987 TTC39CP1-201ENST00000512513 755 ntBASIC2.04□□□□□ -2.08
UBA52P62987 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.04□□□□□ -2.08
UBA52P62987 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.04□□□□□ -2.08
UBA52P62987 OR4R2P-201ENST00000530815 597 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AP000916.1-201ENST00000533869 835 ntBASIC2.04□□□□□ -2.08
UBA52P62987 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.04□□□□□ -2.08
UBA52P62987 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.04□□□□□ -2.08
UBA52P62987 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.04□□□□□ -2.08
UBA52P62987 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.04□□□□□ -2.08
UBA52P62987 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.04□□□□□ -2.08
UBA52P62987 AL158827.2-201ENST00000602494 330 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AC008962.1-201ENST00000605729 304 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AC068722.2-201ENST00000618734 544 ntBASIC2.04□□□□□ -2.08
UBA52P62987 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.04□□□□□ -2.08
UBA52P62987 AL691447.3-201ENST00000635020 330 ntBASIC2.04□□□□□ -2.08
UBA52P62987 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
UBA52P62987 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.03□□□□□ -2.08
UBA52P62987 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 MTND4P1-201ENST00000457501 1466 ntBASIC2.03□□□□□ -2.08
UBA52P62987 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
UBA52P62987 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 RNU6-50P-201ENST00000362356 103 ntBASIC2.03□□□□□ -2.08
UBA52P62987 SNORA41-201ENST00000384675 132 ntBASIC2.03□□□□□ -2.08
UBA52P62987 MIR518C-201ENST00000384822 101 ntBASIC2.03□□□□□ -2.08
UBA52P62987 TOMM20P4-201ENST00000427861 435 ntBASIC2.03□□□□□ -2.08
UBA52P62987 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.03□□□□□ -2.08
UBA52P62987 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.03□□□□□ -2.08
UBA52P62987 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.03□□□□□ -2.08
UBA52P62987 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.03□□□□□ -2.08
UBA52P62987 MTND3P24-201ENST00000506306 329 ntBASIC2.03□□□□□ -2.08
UBA52P62987 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.03□□□□□ -2.08
UBA52P62987 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.03□□□□□ -2.08
UBA52P62987 AC104115.2-201ENST00000523026 687 ntBASIC2.03□□□□□ -2.08
UBA52P62987 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
UBA52P62987 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
UBA52P62987 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.03□□□□□ -2.08
UBA52P62987 AC009063.1-201ENST00000563342 702 ntBASIC2.03□□□□□ -2.08
UBA52P62987 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.03□□□□□ -2.08
UBA52P62987 AC103810.1-201ENST00000579873 453 ntBASIC2.03□□□□□ -2.08
UBA52P62987 MIR4769-201ENST00000584126 77 ntBASIC2.03□□□□□ -2.08
UBA52P62987 AC098826.3-201ENST00000603823 466 ntBASIC2.03□□□□□ -2.08
UBA52P62987 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.03□□□□□ -2.08
UBA52P62987 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.03□□□□□ -2.08
UBA52P62987 AC006329.2-201ENST00000611491 394 ntBASIC2.03□□□□□ -2.08
UBA52P62987 AL110115.1-201ENST00000614396 364 ntBASIC2.03□□□□□ -2.08
UBA52P62987 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
UBA52P62987 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
UBA52P62987 AC099654.7-201ENST00000635788 2127 ntBASIC2.03□□□□□ -2.08
UBA52P62987 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
UBA52P62987 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.03□□□□□ -2.09
UBA52P62987 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBA52P62987 AP006437.1-201ENST00000641440 3685 ntBASIC2.02□□□□□ -2.09
UBA52P62987 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
UBA52P62987 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UBA52P62987 FCF1P1-201ENST00000432690 571 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.02□□□□□ -2.09
UBA52P62987 ELOCP11-201ENST00000436690 332 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.02□□□□□ -2.09
UBA52P62987 ELOCP16-201ENST00000444494 332 ntBASIC2.02□□□□□ -2.09
UBA52P62987 HIGD1AP2-201ENST00000446367 280 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AL353705.4-201ENST00000449661 238 ntBASIC2.02□□□□□ -2.09
UBA52P62987 Z99714.1-201ENST00000450463 807 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AL513343.1-201ENST00000451818 792 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
UBA52P62987 HMGB3P3-201ENST00000510526 400 ntBASIC2.02□□□□□ -2.09
UBA52P62987 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AC087808.1-201ENST00000520501 361 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.02□□□□□ -2.09
UBA52P62987 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.02□□□□□ -2.09
UBA52P62987 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.02□□□□□ -2.09
UBA52P62987 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.02□□□□□ -2.09
UBA52P62987 AC245036.5-201ENST00000596330 847 ntBASIC2.02□□□□□ -2.09
UBA52P62987 AC010620.2-201ENST00000600135 313 ntBASIC2.02□□□□□ -2.09
UBA52P62987 VIS1.1-201ENST00000610517 203 ntBASIC2.02□□□□□ -2.09
UBA52P62987 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
UBA52P62987 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
UBA52P62987 MIR21-201ENST00000362134 72 ntBASIC2.01□□□□□ -2.09
UBA52P62987 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
UBA52P62987 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
UBA52P62987 AC007064.1-201ENST00000412238 351 ntBASIC2.01□□□□□ -2.09
UBA52P62987 AC233981.1-201ENST00000423224 461 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms