Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MTCYBP34-201ENST00000439552 670 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC007327.1-201ENST00000447461 264 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AL031313.1-201ENST00000448435 256 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SRP54P61011 AP001992.1-205ENST00000462248 379 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.34□□□□□ -1.87
SRP54P61011 AC017015.1-201ENST00000477387 286 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC012181.1-201ENST00000479895 423 ntBASIC3.34□□□□□ -1.87
SRP54P61011 ACTG1P13-201ENST00000486987 1043 ntBASIC3.34□□□□□ -1.87
SRP54P61011 RPS3AP50-201ENST00000487064 803 ntBASIC3.34□□□□□ -1.87
SRP54P61011 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 RNU6-583P-201ENST00000516012 92 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP54P61011 AC024224.1-201ENST00000538284 609 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.34□□□□□ -1.87
SRP54P61011 AADACP1-206ENST00000561502 1193 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.34□□□□□ -1.87
SRP54P61011 MIR4474-201ENST00000579189 78 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC067852.3-201ENST00000589177 561 ntBASIC3.34□□□□□ -1.87
SRP54P61011 BNIP3P26-201ENST00000600827 554 ntBASIC3.34□□□□□ -1.87
SRP54P61011 BNIP3P38-201ENST00000601117 544 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AL139022.2-201ENST00000606934 443 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AL391834.2-201ENST00000609982 546 ntBASIC3.34□□□□□ -1.87
SRP54P61011 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.34□□□□□ -1.87
SRP54P61011 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.34□□□□□ -1.87
SRP54P61011 AC127502.3-201ENST00000636170 1206 ntBASIC3.34□□□□□ -1.87
SRP54P61011 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
SRP54P61011 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.34□□□□□ -1.87
SRP54P61011 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SRP54P61011 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SRP54P61011 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SRP54P61011 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.33□□□□□ -1.88
SRP54P61011 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.33□□□□□ -1.88
SRP54P61011 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SRP54P61011 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SRP54P61011 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SRP54P61011 NACA3P-201ENST00000359690 648 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AL136372.1-201ENST00000403060 228 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AL136310.1-201ENST00000404926 654 ntBASIC3.33□□□□□ -1.88
SRP54P61011 RNA5SP80-201ENST00000410475 111 ntBASIC3.33□□□□□ -1.88
SRP54P61011 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC007742.1-201ENST00000425789 329 ntBASIC3.33□□□□□ -1.88
SRP54P61011 DPPA2P1-201ENST00000428060 556 ntBASIC3.33□□□□□ -1.88
SRP54P61011 NANOGP2-201ENST00000435391 727 ntBASIC3.33□□□□□ -1.88
SRP54P61011 ELOCP26-201ENST00000436067 329 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP54P61011 RPL23AP76-201ENST00000441860 458 ntBASIC3.33□□□□□ -1.88
SRP54P61011 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP54P61011 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC005297.2-201ENST00000450430 606 ntBASIC3.33□□□□□ -1.88
SRP54P61011 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
SRP54P61011 MTCO3P11-201ENST00000455103 774 ntBASIC3.33□□□□□ -1.88
SRP54P61011 RPL18AP17-201ENST00000455326 198 ntBASIC3.33□□□□□ -1.88
SRP54P61011 RPS23P3-201ENST00000470993 430 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP54P61011 RPL21P13-201ENST00000488305 481 ntBASIC3.33□□□□□ -1.88
SRP54P61011 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP54P61011 AC119751.4-201ENST00000507498 357 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP54P61011 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.33□□□□□ -1.88
SRP54P61011 APOOP4-201ENST00000513530 597 ntBASIC3.33□□□□□ -1.88
SRP54P61011 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
SRP54P61011 SNORA70.19-201ENST00000516717 90 ntBASIC3.33□□□□□ -1.88
SRP54P61011 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.33□□□□□ -1.88
SRP54P61011 OR5AK1P-201ENST00000524837 922 ntBASIC3.33□□□□□ -1.88
SRP54P61011 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.33□□□□□ -1.88
SRP54P61011 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.33□□□□□ -1.88
SRP54P61011 CR383656.7-201ENST00000548164 174 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC015688.2-201ENST00000584523 262 ntBASIC3.33□□□□□ -1.88
SRP54P61011 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.33□□□□□ -1.88
SRP54P61011 AL109653.1-201ENST00000603091 248 ntBASIC3.33□□□□□ -1.88
SRP54P61011 MIR7112-201ENST00000616126 65 ntBASIC3.33□□□□□ -1.88
SRP54P61011 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
SRP54P61011 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SRP54P61011 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SRP54P61011 AL356473.1-201ENST00000406203 1408 ntBASIC3.33□□□□□ -1.88
SRP54P61011 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.33□□□□□ -1.88
SRP54P61011 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRP54P61011 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SRP54P61011 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
SRP54P61011 AC058791.1-201ENST00000608412 3198 ntBASIC3.32□□□□□ -1.88
SRP54P61011 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SRP54P61011 RNA5SP197-201ENST00000363357 119 ntBASIC3.32□□□□□ -1.88
SRP54P61011 RNU6-525P-201ENST00000363685 104 ntBASIC3.32□□□□□ -1.88
SRP54P61011 DYNLT3P1-201ENST00000378574 347 ntBASIC3.32□□□□□ -1.88
SRP54P61011 Y_RNA.408-201ENST00000383987 102 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AL356131.1-201ENST00000405826 414 ntBASIC3.32□□□□□ -1.88
SRP54P61011 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.32□□□□□ -1.88
SRP54P61011 RPS7P13-201ENST00000413955 498 ntBASIC3.32□□□□□ -1.88
SRP54P61011 RPS3AP37-201ENST00000419176 745 ntBASIC3.32□□□□□ -1.88
SRP54P61011 HSFY7P-201ENST00000432672 318 ntBASIC3.32□□□□□ -1.88
SRP54P61011 OR2B8P-201ENST00000432841 938 ntBASIC3.32□□□□□ -1.88
SRP54P61011 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP54P61011 HSFY8P-201ENST00000437934 318 ntBASIC3.32□□□□□ -1.88
SRP54P61011 HSPE1P28-201ENST00000443139 211 ntBASIC3.32□□□□□ -1.88
SRP54P61011 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms