Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.33□□□□□ -1.72
COPAP53621 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPAP53621 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPAP53621 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPAP53621 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPAP53621 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COPAP53621 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COPAP53621 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPAP53621 SNORA7.2-201ENST00000364446 145 ntBASIC4.32□□□□□ -1.72
COPAP53621 RNA5SP283-201ENST00000365604 119 ntBASIC4.32□□□□□ -1.72
COPAP53621 MIR607-201ENST00000385241 96 ntBASIC4.32□□□□□ -1.72
COPAP53621 RNU2-66P-201ENST00000410650 161 ntBASIC4.32□□□□□ -1.72
COPAP53621 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.32□□□□□ -1.72
COPAP53621 ELOCP17-201ENST00000414751 326 ntBASIC4.32□□□□□ -1.72
COPAP53621 AIMP1P1-201ENST00000418670 937 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.32□□□□□ -1.72
COPAP53621 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.32□□□□□ -1.72
COPAP53621 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.32□□□□□ -1.72
COPAP53621 AL353691.1-201ENST00000451332 387 ntBASIC4.32□□□□□ -1.72
COPAP53621 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.32□□□□□ -1.72
COPAP53621 LARP1BP2-201ENST00000486594 519 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC106872.2-201ENST00000494303 480 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC099522.1-202ENST00000514718 367 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.32□□□□□ -1.72
COPAP53621 AC022878.1-201ENST00000530684 149 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.32□□□□□ -1.72
COPAP53621 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.32□□□□□ -1.72
COPAP53621 MIR4528-201ENST00000577763 90 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.32□□□□□ -1.72
COPAP53621 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 MIR432-201ENST00000606207 94 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC131902.3-201ENST00000611767 581 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC008250.2-201ENST00000615261 205 ntBASIC4.32□□□□□ -1.72
COPAP53621 AC104010.1-201ENST00000616889 150 ntBASIC4.32□□□□□ -1.72
COPAP53621 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 AC112484.5-201ENST00000624189 228 ntBASIC4.32□□□□□ -1.72
COPAP53621 AL603839.4-201ENST00000624658 1005 ntBASIC4.32□□□□□ -1.72
COPAP53621 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COPAP53621 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPAP53621 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
COPAP53621 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPAP53621 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
COPAP53621 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.32□□□□□ -1.72
COPAP53621 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 AC027287.1-201ENST00000553115 1453 ntBASIC4.31□□□□□ -1.72
COPAP53621 USP8P1-201ENST00000494673 3183 ntBASIC4.31□□□□□ -1.72
COPAP53621 AC092125.1-201ENST00000562568 1995 ntBASIC4.31□□□□□ -1.72
COPAP53621 GABPAP-201ENST00000419271 1356 ntBASIC4.31□□□□□ -1.72
COPAP53621 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
COPAP53621 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COPAP53621 AL359704.1-201ENST00000411586 781 ntBASIC4.31□□□□□ -1.72
COPAP53621 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
COPAP53621 AC006548.1-201ENST00000427470 102 ntBASIC4.31□□□□□ -1.72
COPAP53621 C8orf59P1-201ENST00000429930 303 ntBASIC4.31□□□□□ -1.72
COPAP53621 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 EZH2P1-201ENST00000431167 291 ntBASIC4.31□□□□□ -1.72
COPAP53621 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 NPM1P49-201ENST00000448027 714 ntBASIC4.31□□□□□ -1.72
COPAP53621 AL359073.1-201ENST00000448036 403 ntBASIC4.31□□□□□ -1.72
COPAP53621 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.31□□□□□ -1.72
COPAP53621 ABCF2P2-201ENST00000450549 296 ntBASIC4.31□□□□□ -1.72
COPAP53621 ANP32BP2-201ENST00000454525 545 ntBASIC4.31□□□□□ -1.72
COPAP53621 snoU109.4-201ENST00000458953 143 ntBASIC4.31□□□□□ -1.72
COPAP53621 RPL23AP2-201ENST00000471227 466 ntBASIC4.31□□□□□ -1.72
COPAP53621 AC007537.2-201ENST00000472093 511 ntBASIC4.31□□□□□ -1.72
COPAP53621 ST13P14-201ENST00000474095 734 ntBASIC4.31□□□□□ -1.72
COPAP53621 AL132838.2-201ENST00000492041 314 ntBASIC4.31□□□□□ -1.72
COPAP53621 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.31□□□□□ -1.72
COPAP53621 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 SNORA70.14-201ENST00000516205 110 ntBASIC4.31□□□□□ -1.72
COPAP53621 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.31□□□□□ -1.72
COPAP53621 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.31□□□□□ -1.72
COPAP53621 AC074050.1-201ENST00000563247 211 ntBASIC4.31□□□□□ -1.72
COPAP53621 ZNF192P1-203ENST00000565888 810 ntBASIC4.31□□□□□ -1.72
COPAP53621 AC034268.2-201ENST00000571784 482 ntBASIC4.31□□□□□ -1.72
COPAP53621 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.31□□□□□ -1.72
COPAP53621 AC011816.2-201ENST00000607089 556 ntBASIC4.31□□□□□ -1.72
COPAP53621 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.31□□□□□ -1.72
COPAP53621 MIR4727-201ENST00000622232 55 ntBASIC4.31□□□□□ -1.72
COPAP53621 CR381572.1-201ENST00000625098 102 ntBASIC4.31□□□□□ -1.72
COPAP53621 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COPAP53621 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPAP53621 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.3□□□□□ -1.72
COPAP53621 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms