Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC008507.2-201ENST00000588402 1176 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CR1P49238 BNIP3P24-201ENST00000593398 557 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 VN1R87P-201ENST00000596706 487 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 PRELID3BP8-201ENST00000604148 295 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AL031176.1-201ENST00000604554 466 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 HSPE1P7-201ENST00000604681 321 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AP002826.1-201ENST00000608835 315 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AL592148.2-201ENST00000612210 372 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC008759.3-201ENST00000613300 508 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC100793.4-201ENST00000613683 429 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AL138880.2-201ENST00000616214 239 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.72□□□□□ -1.97
CX3CR1P49238 AC006249.1-201ENST00000621223 471 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC007275.1-201ENST00000621243 671 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AP000943.4-201ENST00000622912 357 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AP002371.2-201ENST00000624450 503 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 U6.105-201ENST00000637379 88 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 AC006927.2-201ENST00000639256 389 ntBASIC2.72□□□□□ -1.97
CX3CR1P49238 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CR1P49238 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
CX3CR1P49238 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CX3CR1P49238 TAB3P1-202ENST00000452645 1634 ntBASIC2.71□□□□□ -1.97
CX3CR1P49238 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 OR4G11P-202ENST00000642116 1414 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CX3CR1P49238 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CX3CR1P49238 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 MIR135A2-201ENST00000384854 100 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 LUZP4P1-201ENST00000415420 344 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 AC093155.1-201ENST00000440164 826 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CR1P49238 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CX3CR1P49238 RN7SL863P-201ENST00000462370 296 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 RPS4XP10-201ENST00000465034 731 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AC109925.1-201ENST00000478069 331 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AC108860.1-201ENST00000484521 383 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AC069306.1-201ENST00000507006 843 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.71□□□□□ -1.98
CX3CR1P49238 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CR1P49238 AP001189.2-201ENST00000527320 189 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.71□□□□□ -1.98
CX3CR1P49238 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.71□□□□□ -1.98
CX3CR1P49238 AL445435.1-201ENST00000604232 665 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AL512427.1-201ENST00000618593 349 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 AL157770.1-201ENST00000623049 439 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CX3CR1P49238 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 API5P2-201ENST00000397055 1498 ntBASIC2.71□□□□□ -1.98
CX3CR1P49238 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CR1P49238 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CX3CR1P49238 RNU6-799P-201ENST00000363567 107 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CR1P49238 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CX3CR1P49238 SNORD15B-201ENST00000384714 146 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 MIR183-201ENST00000384958 110 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 ATP5F1P3-201ENST00000397213 657 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 SNRPEP2-201ENST00000397592 279 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.7□□□□□ -1.98
CX3CR1P49238 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CR1P49238 EZH2P1-201ENST00000431167 291 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AL050321.1-201ENST00000432363 400 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CR1P49238 AC011242.1-201ENST00000433596 1158 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 SEPT7P5-201ENST00000434048 306 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CR1P49238 RPL32P34-201ENST00000486380 400 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AP002812.1-201ENST00000495378 474 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AC026414.1-201ENST00000504046 698 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CR1P49238 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CX3CR1P49238 RN7SKP282-201ENST00000516824 299 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AC104417.1-201ENST00000523974 751 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.7□□□□□ -1.98
CX3CR1P49238 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.7□□□□□ -1.98
CX3CR1P49238 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.7□□□□□ -1.98
CX3CR1P49238 AC138915.2-201ENST00000569776 97 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 OR4K8P-201ENST00000578842 1048 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.7□□□□□ -1.98
CX3CR1P49238 GLUD1P4-201ENST00000590914 418 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AC068620.3-201ENST00000602749 560 ntBASIC2.7□□□□□ -1.98
CX3CR1P49238 AC013444.2-201ENST00000603317 787 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms