Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.03□□□□□ -2.08
HTTP42858 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.03□□□□□ -2.08
HTTP42858 AC025946.2-201ENST00000603398 234 ntBASIC2.03□□□□□ -2.08
HTTP42858 AL645939.4-201ENST00000604495 135 ntBASIC2.03□□□□□ -2.08
HTTP42858 AC131902.3-201ENST00000611767 581 ntBASIC2.03□□□□□ -2.08
HTTP42858 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.03□□□□□ -2.08
HTTP42858 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HTTP42858 NCSTNP1-201ENST00000406229 144 ntBASIC2.03□□□□□ -2.08
HTTP42858 UBE2V1P5-201ENST00000440070 405 ntBASIC2.03□□□□□ -2.08
HTTP42858 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.03□□□□□ -2.08
HTTP42858 AC006390.1-201ENST00000508068 283 ntBASIC2.03□□□□□ -2.08
HTTP42858 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
HTTP42858 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.03□□□□□ -2.08
HTTP42858 AL161670.1-201ENST00000554348 137 ntBASIC2.03□□□□□ -2.08
HTTP42858 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.03□□□□□ -2.08
HTTP42858 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.03□□□□□ -2.08
HTTP42858 SEPT7P7-201ENST00000420492 1301 ntBASIC2.03□□□□□ -2.09
HTTP42858 RNU2-20P-201ENST00000410425 191 ntBASIC2.02□□□□□ -2.09
HTTP42858 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.02□□□□□ -2.09
HTTP42858 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.02□□□□□ -2.09
HTTP42858 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.02□□□□□ -2.09
HTTP42858 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.02□□□□□ -2.09
HTTP42858 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.02□□□□□ -2.09
HTTP42858 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.02□□□□□ -2.09
HTTP42858 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HTTP42858 Y_RNA.36-201ENST00000362602 112 ntBASIC2.02□□□□□ -2.09
HTTP42858 AL358075.3-201ENST00000426289 226 ntBASIC2.02□□□□□ -2.09
HTTP42858 PIGFP3-201ENST00000441918 722 ntBASIC2.02□□□□□ -2.09
HTTP42858 BMS1P7-201ENST00000602440 1052 ntBASIC2.02□□□□□ -2.09
HTTP42858 AL035411.2-201ENST00000604022 421 ntBASIC2.02□□□□□ -2.09
HTTP42858 AC019159.1-201ENST00000605094 187 ntBASIC2.02□□□□□ -2.09
HTTP42858 AL133412.1-201ENST00000380194 2992 ntBASIC2.02□□□□□ -2.09
HTTP42858 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HTTP42858 MIR625-201ENST00000385047 85 ntBASIC2.02□□□□□ -2.09
HTTP42858 ATP5F1P1-201ENST00000433775 569 ntBASIC2.02□□□□□ -2.09
HTTP42858 ARPC3P1-201ENST00000437218 533 ntBASIC2.02□□□□□ -2.09
HTTP42858 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.02□□□□□ -2.09
HTTP42858 RPL21P18-201ENST00000469899 480 ntBASIC2.02□□□□□ -2.09
HTTP42858 AC092185.1-201ENST00000491371 97 ntBASIC2.02□□□□□ -2.09
HTTP42858 IGKV2D-36-201ENST00000518643 226 ntBASIC2.02□□□□□ -2.09
HTTP42858 FAM92A1P1-201ENST00000528023 890 ntBASIC2.02□□□□□ -2.09
HTTP42858 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.02□□□□□ -2.09
HTTP42858 AC005730.3-201ENST00000583067 366 ntBASIC2.02□□□□□ -2.09
HTTP42858 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HTTP42858 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HTTP42858 RNU6-53P-201ENST00000365367 106 ntBASIC2.01□□□□□ -2.09
HTTP42858 MUPP-201ENST00000438111 566 ntBASIC2.01□□□□□ -2.09
HTTP42858 AC023043.3-201ENST00000593113 385 ntBASIC2.01□□□□□ -2.09
HTTP42858 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HTTP42858 AC245517.2-201ENST00000442890 346 ntBASIC2.01□□□□□ -2.09
HTTP42858 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.01□□□□□ -2.09
HTTP42858 AL122125.1-201ENST00000616999 600 ntBASIC2.01□□□□□ -2.09
HTTP42858 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HTTP42858 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HTTP42858 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HTTP42858 POLHP1-201ENST00000411806 470 ntBASIC2□□□□□ -2.09
HTTP42858 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
HTTP42858 MED6P1-201ENST00000439659 713 ntBASIC2□□□□□ -2.09
HTTP42858 USP9YP15-201ENST00000442391 422 ntBASIC2□□□□□ -2.09
HTTP42858 RPS4XP11-201ENST00000446897 772 ntBASIC2□□□□□ -2.09
HTTP42858 GSTA11P-201ENST00000452866 669 ntBASIC2□□□□□ -2.09
HTTP42858 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2□□□□□ -2.09
HTTP42858 Y_RNA.458-201ENST00000384240 102 ntBASIC2□□□□□ -2.09
HTTP42858 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2□□□□□ -2.09
HTTP42858 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2□□□□□ -2.09
HTTP42858 MTND6P18-201ENST00000439477 513 ntBASIC2□□□□□ -2.09
HTTP42858 AP002748.2-201ENST00000528671 348 ntBASIC2□□□□□ -2.09
HTTP42858 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2□□□□□ -2.09
HTTP42858 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HTTP42858 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HTTP42858 MTND5P3-201ENST00000438536 1800 ntBASIC2□□□□□ -2.09
HTTP42858 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2□□□□□ -2.09
HTTP42858 AL138787.1-202ENST00000437804 898 ntBASIC2□□□□□ -2.09
HTTP42858 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2□□□□□ -2.09
HTTP42858 OR10D4P-201ENST00000525892 951 ntBASIC2□□□□□ -2.09
HTTP42858 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2□□□□□ -2.09
HTTP42858 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
HTTP42858 TOMM22P1-201ENST00000418578 312 ntBASIC1.99□□□□□ -2.09
HTTP42858 AC024560.3-201ENST00000608482 349 ntBASIC1.99□□□□□ -2.09
HTTP42858 uc_338.5-201ENST00000611839 155 ntBASIC1.99□□□□□ -2.09
HTTP42858 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.99□□□□□ -2.09
HTTP42858 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HTTP42858 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.99□□□□□ -2.09
HTTP42858 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HTTP42858 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HTTP42858 RPL23AP48-201ENST00000406913 488 ntBASIC1.99□□□□□ -2.09
HTTP42858 AL513331.1-201ENST00000411908 397 ntBASIC1.99□□□□□ -2.09
HTTP42858 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.99□□□□□ -2.09
HTTP42858 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.99□□□□□ -2.09
HTTP42858 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.99□□□□□ -2.09
HTTP42858 OR4G1P-201ENST00000588632 938 ntBASIC1.99□□□□□ -2.09
HTTP42858 AC105429.2-201ENST00000610567 517 ntBASIC1.99□□□□□ -2.09
HTTP42858 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HTTP42858 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HTTP42858 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.98□□□□□ -2.09
HTTP42858 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.98□□□□□ -2.09
HTTP42858 MIR4421-201ENST00000578133 69 ntBASIC1.98□□□□□ -2.09
HTTP42858 AC103987.3-201ENST00000582071 292 ntBASIC1.98□□□□□ -2.09
HTTP42858 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.98□□□□□ -2.09
HTTP42858 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms