Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
CIITAP33076 AC091489.2-201ENST00000566263 604 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.2□□□□□ -1.74
CIITAP33076 EIF1P4-201ENST00000572664 335 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC141257.3-201ENST00000572906 215 ntBASIC4.2□□□□□ -1.74
CIITAP33076 MTND1P15-201ENST00000579262 949 ntBASIC4.2□□□□□ -1.74
CIITAP33076 MIR3158-1-201ENST00000583596 81 ntBASIC4.2□□□□□ -1.74
CIITAP33076 YWHAQP7-201ENST00000603536 658 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC090186.1-201ENST00000605991 572 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AL513477.2-201ENST00000607858 568 ntBASIC4.2□□□□□ -1.74
CIITAP33076 AC103858.2-201ENST00000621471 543 ntBASIC4.2□□□□□ -1.74
CIITAP33076 CR392039.5-201ENST00000623201 510 ntBASIC4.2□□□□□ -1.74
CIITAP33076 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.2□□□□□ -1.74
CIITAP33076 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.2□□□□□ -1.74
CIITAP33076 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
CIITAP33076 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.2□□□□□ -1.74
CIITAP33076 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.2□□□□□ -1.74
CIITAP33076 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CIITAP33076 ZNF285B-201ENST00000561698 1767 ntBASIC4.19□□□□□ -1.74
CIITAP33076 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.19□□□□□ -1.74
CIITAP33076 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CIITAP33076 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.19□□□□□ -1.74
CIITAP33076 FGF7P2-201ENST00000332473 296 ntBASIC4.19□□□□□ -1.74
CIITAP33076 SNORA73.2-201ENST00000364946 201 ntBASIC4.19□□□□□ -1.74
CIITAP33076 RNU6-1226P-201ENST00000384317 107 ntBASIC4.19□□□□□ -1.74
CIITAP33076 RNU6-348P-201ENST00000384386 107 ntBASIC4.19□□□□□ -1.74
CIITAP33076 SNORD3H-201ENST00000384486 214 ntBASIC4.19□□□□□ -1.74
CIITAP33076 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.19□□□□□ -1.74
CIITAP33076 RN7SKP27-201ENST00000410684 333 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AL133384.1-201ENST00000412744 351 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC007899.1-201ENST00000412776 775 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.19□□□□□ -1.74
CIITAP33076 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.19□□□□□ -1.74
CIITAP33076 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CIITAP33076 AC092641.1-201ENST00000440229 772 ntBASIC4.19□□□□□ -1.74
CIITAP33076 Z95327.1-201ENST00000446082 482 ntBASIC4.19□□□□□ -1.74
CIITAP33076 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.19□□□□□ -1.74
CIITAP33076 CFTRP1-201ENST00000456646 183 ntBASIC4.19□□□□□ -1.74
CIITAP33076 SNORA84-201ENST00000459229 133 ntBASIC4.19□□□□□ -1.74
CIITAP33076 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CIITAP33076 AC106872.2-201ENST00000494303 480 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.19□□□□□ -1.74
CIITAP33076 AC096751.1-202ENST00000502691 1067 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.19□□□□□ -1.74
CIITAP33076 BTF3L4P4-201ENST00000506381 449 ntBASIC4.19□□□□□ -1.74
CIITAP33076 MTND2P33-201ENST00000506452 1031 ntBASIC4.19□□□□□ -1.74
CIITAP33076 ARL2BPP4-201ENST00000506854 471 ntBASIC4.19□□□□□ -1.74
CIITAP33076 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.19□□□□□ -1.74
CIITAP33076 AF213884.2-201ENST00000510417 903 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC023141.12-201ENST00000512399 199 ntBASIC4.19□□□□□ -1.74
CIITAP33076 FTH1P9-201ENST00000513251 355 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.19□□□□□ -1.74
CIITAP33076 RNU6-150P-201ENST00000516237 95 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC104986.1-201ENST00000517978 436 ntBASIC4.19□□□□□ -1.74
CIITAP33076 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.19□□□□□ -1.74
CIITAP33076 TRMT10BP1-201ENST00000519377 943 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.19□□□□□ -1.74
CIITAP33076 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.19□□□□□ -1.74
CIITAP33076 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.19□□□□□ -1.74
CIITAP33076 AC092470.1-201ENST00000546187 132 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.19□□□□□ -1.74
CIITAP33076 AC027807.1-201ENST00000559921 996 ntBASIC4.19□□□□□ -1.74
CIITAP33076 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.19□□□□□ -1.74
CIITAP33076 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CIITAP33076 AC107304.1-201ENST00000604229 296 ntBASIC4.19□□□□□ -1.74
CIITAP33076 AC245389.1-201ENST00000605141 529 ntBASIC4.19□□□□□ -1.74
CIITAP33076 ZNF734P-201ENST00000419494 1534 ntBASIC4.19□□□□□ -1.74
CIITAP33076 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CIITAP33076 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CIITAP33076 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.18□□□□□ -1.74
CIITAP33076 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CIITAP33076 RNU5F-6P-201ENST00000362979 116 ntBASIC4.18□□□□□ -1.74
CIITAP33076 SNORA5A-201ENST00000384111 134 ntBASIC4.18□□□□□ -1.74
CIITAP33076 HMGN2P8-201ENST00000391458 268 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AL121972.1-201ENST00000402023 252 ntBASIC4.18□□□□□ -1.74
CIITAP33076 MTCYBP36-201ENST00000404146 440 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.18□□□□□ -1.74
CIITAP33076 ATP5A1P2-201ENST00000412323 255 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.18□□□□□ -1.74
CIITAP33076 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.18□□□□□ -1.74
CIITAP33076 AL035423.1-201ENST00000420331 213 ntBASIC4.18□□□□□ -1.74
CIITAP33076 RPL21P109-201ENST00000422213 475 ntBASIC4.18□□□□□ -1.74
CIITAP33076 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CIITAP33076 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.18□□□□□ -1.74
CIITAP33076 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CIITAP33076 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.18□□□□□ -1.74
CIITAP33076 MTCO1P27-201ENST00000448269 226 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.18□□□□□ -1.74
CIITAP33076 SNRPGP5-201ENST00000456003 220 ntBASIC4.18□□□□□ -1.74
CIITAP33076 TRBV26-201ENST00000456572 344 ntBASIC4.18□□□□□ -1.74
CIITAP33076 RPL7P15-201ENST00000461190 712 ntBASIC4.18□□□□□ -1.74
CIITAP33076 RPS15AP17-201ENST00000470598 390 ntBASIC4.18□□□□□ -1.74
CIITAP33076 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.18□□□□□ -1.74
CIITAP33076 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.18□□□□□ -1.74
CIITAP33076 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.18□□□□□ -1.74
CIITAP33076 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.18□□□□□ -1.74
CIITAP33076 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.18□□□□□ -1.74
CIITAP33076 AC010342.1-201ENST00000514047 877 ntBASIC4.18□□□□□ -1.74
CIITAP33076 RNU6-405P-201ENST00000516637 110 ntBASIC4.18□□□□□ -1.74
CIITAP33076 RANP9-201ENST00000519957 271 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms