Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DPA1P20036 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DPA1P20036 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
HLA-DPA1P20036 AL049781.1-201ENST00000623195 3585 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 MIR30E-201ENST00000362104 92 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 RNA5SP50-201ENST00000363731 107 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 Y_RNA.472-201ENST00000384322 102 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 SKINT1L-201ENST00000401057 817 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC093578.1-201ENST00000415219 368 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 CCDC58P2-201ENST00000417131 366 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 TRIAP1P1-201ENST00000427062 225 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 RPL23AP76-201ENST00000441860 458 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC234775.1-201ENST00000454247 670 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 RN7SL293P-201ENST00000481765 281 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 RPL32P34-201ENST00000486380 400 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC068724.1-201ENST00000487100 792 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC022483.1-201ENST00000514020 567 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 CCNG2P1-201ENST00000549521 1000 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 MIR3944-201ENST00000581277 108 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AL138880.2-201ENST00000616214 239 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC092628.2-201ENST00000622492 339 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 LINC02211-204ENST00000642024 1070 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DPA1P20036 AC008568.2-201ENST00000623862 2313 ntBASIC3.41□□□□□ -1.86
HLA-DPA1P20036 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DPA1P20036 SNORA63.1-201ENST00000362493 131 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RNU5E-10P-201ENST00000363506 118 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 MIR183-201ENST00000384958 110 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RPS3AP24-201ENST00000407896 734 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RN7SKP285-201ENST00000410137 318 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RPS3AP25-201ENST00000411660 793 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL356968.1-201ENST00000416622 474 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL139421.1-201ENST00000423010 169 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL358794.1-201ENST00000445689 381 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL049714.1-201ENST00000466686 347 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RPL7P49-201ENST00000471402 708 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC109464.2-201ENST00000510242 943 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC008837.2-201ENST00000513076 418 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC017037.2-201ENST00000513850 890 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 MIR2276-201ENST00000516886 89 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 MIR3921-201ENST00000577308 85 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC105224.1-201ENST00000587055 421 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC022146.1-201ENST00000595307 847 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 BNIP3P27-201ENST00000599991 412 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AP000254.1-201ENST00000609934 520 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AL121895.2-201ENST00000619558 447 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC231657.1-201ENST00000624313 397 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC127502.3-201ENST00000636170 1206 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 U6.105-201ENST00000637379 88 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC099654.8-201ENST00000637757 681 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 AC005539.1-201ENST00000443768 1479 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.4□□□□□ -1.87
HLA-DPA1P20036 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms