Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TOP2AP11388 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.19□□□□□ -1.9
TOP2AP11388 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TOP2AP11388 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TOP2AP11388 SNORA51.11-201ENST00000384442 131 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 SNORA67.5-201ENST00000391036 107 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 AL513331.1-201ENST00000411908 397 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 RAD23BP2-201ENST00000416003 1207 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 BTF3P4-201ENST00000418852 495 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.19□□□□□ -1.9
TOP2AP11388 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.19□□□□□ -1.9
TOP2AP11388 AC090543.1-201ENST00000492168 485 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.19□□□□□ -1.9
TOP2AP11388 OR4K7P-201ENST00000580232 945 ntBASIC3.19□□□□□ -1.9
TOP2AP11388 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.18□□□□□ -1.9
TOP2AP11388 NEK4P1-201ENST00000433383 879 ntBASIC3.18□□□□□ -1.9
TOP2AP11388 AC079804.2-201ENST00000490376 200 ntBASIC3.18□□□□□ -1.9
TOP2AP11388 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP2AP11388 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TOP2AP11388 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TOP2AP11388 AP001148.1-201ENST00000624124 2359 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 RPL23AP20-201ENST00000447965 421 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 AC109486.1-201ENST00000486833 374 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 AC020895.1-201ENST00000595362 272 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 VN1R74P-201ENST00000613259 503 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 ZNF271P-202ENST00000465539 1970 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 AC006378.2-201ENST00000623178 2476 ntBASIC3.17□□□□□ -1.9
TOP2AP11388 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TOP2AP11388 Y_RNA.118-201ENST00000363300 101 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.16□□□□□ -1.9
TOP2AP11388 CDC42P1-201ENST00000456658 548 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 GTF2IP9-201ENST00000502460 301 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TOP2AP11388 HMGN1P28-201ENST00000521340 364 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TOP2AP11388 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.16□□□□□ -1.9
TOP2AP11388 RPS3AP4-201ENST00000555161 764 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.16□□□□□ -1.9
TOP2AP11388 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TOP2AP11388 AL512283.1-201ENST00000606756 1384 ntBASIC3.16□□□□□ -1.9
TOP2AP11388 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.15□□□□□ -1.9
TOP2AP11388 MIRLET7G-201ENST00000362280 84 ntBASIC3.15□□□□□ -1.9
TOP2AP11388 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.9
TOP2AP11388 AL353729.1-201ENST00000425044 720 ntBASIC3.15□□□□□ -1.9
TOP2AP11388 AL590664.1-201ENST00000448065 339 ntBASIC3.15□□□□□ -1.9
TOP2AP11388 AC126177.3-201ENST00000551839 688 ntBASIC3.15□□□□□ -1.9
TOP2AP11388 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.15□□□□□ -1.9
TOP2AP11388 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.15□□□□□ -1.9
TOP2AP11388 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.15□□□□□ -1.9
TOP2AP11388 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TOP2AP11388 KPNA2P1-201ENST00000458289 1591 ntBASIC3.15□□□□□ -1.91
TOP2AP11388 RNY1P10-201ENST00000363268 113 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.14□□□□□ -1.91
TOP2AP11388 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TOP2AP11388 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.14□□□□□ -1.91
TOP2AP11388 HMGB1P31-201ENST00000437242 427 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.14□□□□□ -1.91
TOP2AP11388 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP2AP11388 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.14□□□□□ -1.91
TOP2AP11388 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AC000367.1-201ENST00000452711 1766 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 MIR1287-201ENST00000408492 90 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AC089999.1-201ENST00000460336 374 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AC140059.1-201ENST00000489238 361 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.14□□□□□ -1.91
TOP2AP11388 AC090751.1-201ENST00000566966 267 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AC002984.1-201ENST00000591692 448 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 AC092954.1-201ENST00000609121 445 ntBASIC3.14□□□□□ -1.91
TOP2AP11388 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
TOP2AP11388 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TOP2AP11388 AL139811.1-201ENST00000424779 2299 ntBASIC3.13□□□□□ -1.91
TOP2AP11388 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TOP2AP11388 MTCO1P14-201ENST00000441695 1559 ntBASIC3.13□□□□□ -1.91
TOP2AP11388 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.13□□□□□ -1.91
TOP2AP11388 AC008083.2-201ENST00000546707 476 ntBASIC3.13□□□□□ -1.91
TOP2AP11388 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.13□□□□□ -1.91
TOP2AP11388 MIR8081-201ENST00000611533 95 ntBASIC3.13□□□□□ -1.91
TOP2AP11388 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.13□□□□□ -1.91
TOP2AP11388 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.13□□□□□ -1.91
TOP2AP11388 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.12□□□□□ -1.91
TOP2AP11388 HMGB1P12-201ENST00000438594 598 ntBASIC3.12□□□□□ -1.91
TOP2AP11388 RPL21P2-201ENST00000440049 481 ntBASIC3.12□□□□□ -1.91
TOP2AP11388 AC009961.3-201ENST00000449832 765 ntBASIC3.12□□□□□ -1.91
TOP2AP11388 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.12□□□□□ -1.91
TOP2AP11388 OR4P1P-201ENST00000530808 1136 ntBASIC3.12□□□□□ -1.91
TOP2AP11388 AL121917.1-203ENST00000605534 577 ntBASIC3.12□□□□□ -1.91
TOP2AP11388 HMGN2P28-201ENST00000606102 262 ntBASIC3.12□□□□□ -1.91
TOP2AP11388 RNU2-17P-201ENST00000410290 190 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.11□□□□□ -1.91
TOP2AP11388 DPPA2P1-201ENST00000428060 556 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 XKRY2-201ENST00000442362 1093 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 USP9YP15-201ENST00000442391 422 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 RNU7-95P-201ENST00000459222 64 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 MLLT10P2-201ENST00000506434 249 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.11□□□□□ -1.91
TOP2AP11388 OR4T1P-201ENST00000554933 911 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 AC068446.3-201ENST00000555285 382 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms