Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RNU6-714P-201ENST00000516963 103 ntBASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 RANP9-201ENST00000519957 271 ntBASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 AC244505.7-201ENST00000599675 272 ntBASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.5□□□□□ -1.85
RAB40ALP0C0E4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AL645937.1-201ENST00000641739 1652 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RNU6-97P-201ENST00000363387 104 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RNA5SP387-201ENST00000364226 106 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 MIR183-201ENST00000384958 110 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RPS3AP26-201ENST00000398259 784 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RN7SKP266-201ENST00000410232 287 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 UBE2D3P1-201ENST00000436669 444 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 OR6K5P-201ENST00000447050 945 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AL133217.1-201ENST00000450980 425 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC073387.1-201ENST00000453261 709 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RNU7-125P-201ENST00000458760 62 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RN7SL293P-201ENST00000481765 281 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AL024509.2-201ENST00000493462 493 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC093278.1-201ENST00000494700 600 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC021146.1-201ENST00000511202 716 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC087276.1-201ENST00000529659 480 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC090877.1-201ENST00000561418 344 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC006960.3-201ENST00000561845 705 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 SRGNP1-201ENST00000603392 451 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC010591.1-201ENST00000603941 649 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC243312.2-201ENST00000623340 601 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AC244258.1-201ENST00000637553 1071 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 OR6C71P-202ENST00000641886 1107 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AL133383.2-201ENST00000622958 2336 ntBASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.49□□□□□ -1.85
RAB40ALP0C0E4 AL353746.1-201ENST00000566293 6881 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 RNU6-1207P-201ENST00000384343 107 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL049545.1-201ENST00000401856 572 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 HLFP1-201ENST00000402375 499 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 RNU2-71P-201ENST00000411395 189 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 VPS26BP1-201ENST00000417155 755 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 BEND7P1-201ENST00000422058 457 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 CYCSP4-201ENST00000429682 331 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 CYCSP43-201ENST00000438233 310 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AC092641.1-201ENST00000440229 772 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 RPL21P23-201ENST00000446654 460 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 HMGN2P7-201ENST00000456186 273 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 VN1R17P-201ENST00000472048 1090 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AC106872.3-201ENST00000495104 446 ntBASIC3.48□□□□□ -1.85
RAB40ALP0C0E4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms