Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.88□□□□□ -1.79
RB1P06400 MTCYBP43-201ENST00000513621 740 ntBASIC3.88□□□□□ -1.79
RB1P06400 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 COX6CP8-201ENST00000522620 226 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 OR6C7P-201ENST00000547875 934 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.88□□□□□ -1.79
RB1P06400 AL121603.1-201ENST00000553815 142 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC090888.2-201ENST00000559765 1144 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC090877.1-201ENST00000561418 344 ntBASIC3.88□□□□□ -1.79
RB1P06400 ZNF192P1-203ENST00000565888 810 ntBASIC3.88□□□□□ -1.79
RB1P06400 ISCA1P3-201ENST00000577104 373 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 BBIP1P1-201ENST00000602999 279 ntBASIC3.88□□□□□ -1.79
RB1P06400 XIAPP1-201ENST00000603162 600 ntBASIC3.88□□□□□ -1.79
RB1P06400 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.88□□□□□ -1.79
RB1P06400 AC079416.3-201ENST00000624479 549 ntBASIC3.88□□□□□ -1.79
RB1P06400 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.88□□□□□ -1.79
RB1P06400 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
RB1P06400 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RB1P06400 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RB1P06400 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RB1P06400 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RB1P06400 AC087359.1-201ENST00000508335 1740 ntBASIC3.87□□□□□ -1.79
RB1P06400 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.87□□□□□ -1.79
RB1P06400 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RB1P06400 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RB1P06400 RNU6-462P-201ENST00000362659 105 ntBASIC3.87□□□□□ -1.79
RB1P06400 MIR128-1-201ENST00000384921 82 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RB1P06400 AC107081.1-201ENST00000414975 361 ntBASIC3.87□□□□□ -1.79
RB1P06400 RAD23BP2-201ENST00000416003 1207 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC083875.1-201ENST00000419509 405 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC005300.1-201ENST00000428401 373 ntBASIC3.87□□□□□ -1.79
RB1P06400 MTND5P25-201ENST00000430499 799 ntBASIC3.87□□□□□ -1.79
RB1P06400 MTND4LP10-201ENST00000435146 291 ntBASIC3.87□□□□□ -1.79
RB1P06400 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.87□□□□□ -1.79
RB1P06400 AC002381.1-201ENST00000447049 280 ntBASIC3.87□□□□□ -1.79
RB1P06400 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.87□□□□□ -1.79
RB1P06400 SNRPGP3-201ENST00000469405 227 ntBASIC3.87□□□□□ -1.79
RB1P06400 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RB1P06400 NIPA2P2-201ENST00000496376 1083 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.87□□□□□ -1.79
RB1P06400 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.87□□□□□ -1.79
RB1P06400 RNU1-103P-201ENST00000516502 125 ntBASIC3.87□□□□□ -1.79
RB1P06400 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.87□□□□□ -1.79
RB1P06400 SNORA31.20-201ENST00000517111 133 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.87□□□□□ -1.79
RB1P06400 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RB1P06400 AC126177.3-201ENST00000551839 688 ntBASIC3.87□□□□□ -1.79
RB1P06400 SETP7-201ENST00000552169 453 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.87□□□□□ -1.79
RB1P06400 VN1R90P-201ENST00000595717 726 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC020914.4-201ENST00000597690 277 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC021171.1-201ENST00000603137 706 ntBASIC3.87□□□□□ -1.79
RB1P06400 AC012669.1-201ENST00000603209 283 ntBASIC3.87□□□□□ -1.79
RB1P06400 AL139344.1-201ENST00000605228 195 ntBASIC3.87□□□□□ -1.79
RB1P06400 AL365503.1-201ENST00000605247 905 ntBASIC3.87□□□□□ -1.79
RB1P06400 RNU6-88P-201ENST00000606801 100 ntBASIC3.87□□□□□ -1.79
RB1P06400 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RB1P06400 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RB1P06400 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RB1P06400 IPO8P1-201ENST00000455509 3109 ntBASIC3.86□□□□□ -1.79
RB1P06400 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RB1P06400 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RB1P06400 UBE3AP2-201ENST00000429033 2259 ntBASIC3.86□□□□□ -1.79
RB1P06400 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RB1P06400 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RB1P06400 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RB1P06400 BDP1P-201ENST00000582658 1990 ntBASIC3.86□□□□□ -1.79
RB1P06400 RNA5SP235-201ENST00000365411 114 ntBASIC3.86□□□□□ -1.79
RB1P06400 RNU6-253P-201ENST00000384730 105 ntBASIC3.86□□□□□ -1.79
RB1P06400 MIR607-201ENST00000385241 96 ntBASIC3.86□□□□□ -1.79
RB1P06400 HSPE1P26-201ENST00000405341 275 ntBASIC3.86□□□□□ -1.79
RB1P06400 MTCO3P12-201ENST00000416718 547 ntBASIC3.86□□□□□ -1.79
RB1P06400 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.86□□□□□ -1.79
RB1P06400 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.86□□□□□ -1.79
RB1P06400 OR1AA1P-201ENST00000419597 916 ntBASIC3.86□□□□□ -1.79
RB1P06400 AL159169.1-201ENST00000421119 127 ntBASIC3.86□□□□□ -1.79
RB1P06400 RPL7P34-201ENST00000433316 712 ntBASIC3.86□□□□□ -1.79
RB1P06400 AC096638.2-201ENST00000434965 711 ntBASIC3.86□□□□□ -1.79
RB1P06400 MTCYBP45-201ENST00000435243 565 ntBASIC3.86□□□□□ -1.79
RB1P06400 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.86□□□□□ -1.79
RB1P06400 MTND5P2-201ENST00000442927 1142 ntBASIC3.86□□□□□ -1.79
RB1P06400 HMGB1P15-201ENST00000453854 435 ntBASIC3.86□□□□□ -1.79
RB1P06400 ATG12P2-201ENST00000456830 416 ntBASIC3.86□□□□□ -1.79
RB1P06400 MTCO2P6-201ENST00000463134 685 ntBASIC3.86□□□□□ -1.79
RB1P06400 ST13P14-201ENST00000474095 734 ntBASIC3.86□□□□□ -1.79
RB1P06400 RPL31P13-201ENST00000484151 370 ntBASIC3.86□□□□□ -1.79
RB1P06400 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.86□□□□□ -1.79
RB1P06400 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms